Polynucleobacter ibericus: AOC20_07750
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Entry
AOC20_07750 CDS
T09789
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03030
DNA replication
piu03430
Mismatch repair
piu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC20_07750
03430 Mismatch repair
AOC20_07750
03440 Homologous recombination
AOC20_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piu03032
]
AOC20_07750
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_07750
Enzymes [BR:
piu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC20_07750
DNA replication proteins [BR:
piu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC20_07750
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC20_07750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QWE08310
LinkDB
All DBs
Position
complement(1517849..1519252)
Genome browser
AA seq
467 aa
AA seq
DB search
MSSEECPLPDLAFVDIETTGSHFDRDRITEIGIKTLSNGEIQVWESLINPQTFIPQNIQR
LTGISPAMVADQPCFAELAQKLKKELEGKIFVAHNARFDYGFIKASFKRVGIDFKPKVLC
TVKLSRLLFPDQPRHNLDTIIGAHGLTVSARHRALGDADLLLQFWRVCESKFGQAKLHEV
INQLIGNASLPPNIDQGLIDSIPDGPGCYIFYGDNKVPLYIGKSIALRSRVMGHFQGALT
QRKEMKLSLQVRDIDWIETSGELGALILESRLIKERMPSMNIKLRRSKDLCAWSLELDAF
GVLTPSLVTHHHLAPGLQENLYGLFYSKREAHSYLKAIAKKYHLCEALLGLEKRIEGKSC
FGYQVKQCGGACVNLTSIELHNLQLKTAMELFKIKVWPYSGAIAIKEGGEMIVIDKWCYL
GTAINQDELEELTQSGEAEFDLDIYKIVKKALSGAYQNQVIPIGCNK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagcgaggaatgcccgcttccagatttagcatttgttgatattgaaacaacgggg
tctcattttgaccgtgatcgtattacagagattggaatcaaaaccctatctaatggagag
attcaggtctgggaaagtttaattaatccacaaacctttatcccgcaaaatattcaaaga
ctcactggcatctctcctgccatggttgccgatcagccttgctttgctgagctagcccag
aaattaaaaaaagagctagagggaaaaatatttgttgcccataacgctcgctttgactat
ggcttcatcaaagcctcttttaagcgggtggggattgatttcaagccaaaagtattgtgt
accgtcaagctttcgagactgctttttccagatcagccgcgccacaaccttgacaccatt
attggcgctcatgggctaacagtaagcgctagacatcgcgccttaggcgatgctgatttg
ttgctgcaattttggcgtgtgtgcgagtccaagtttggtcaagcaaaattgcatgaagtg
atcaaccaactgattggtaatgcgagcctacctccaaacatagatcagggattaatcgac
tcgataccagatggtcctggctgctatatcttctatggggataataaggtgcccctttat
atcggtaaaagcattgccttgcgcagcagggtgatggggcactttcagggagctttaacg
caacgtaaagagatgaagctgtctttacaggttcgcgatattgattggattgagacaagt
ggggagttaggcgccttaattctcgagtcgagattaattaaagagcgtatgccttcaatg
aatatcaagctgcgcagatctaaggatctgtgtgcctggagtttggaattggatgcattt
ggtgtgctgacaccttccttggtgacccaccatcatttagcccctggcttacaagagaat
ttatacggactcttttatagcaagcgagaagcacattcatatttaaaggcaatagcaaaa
aaataccatttatgtgaagcattgcttggtcttgaaaaaagaattgaaggcaagtcttgc
tttggttatcaagtcaaacaatgtggtggggcttgcgttaaccttacatctattgagtta
cataaccttcagttaaaaacagcgatggagctcttcaagataaaggtctggccatactct
ggagccattgccattaaagaaggtggcgaaatgattgtgattgataaatggtgttatcta
ggaaccgccattaatcaagatgagcttgaagaattaacccagtcaggagaggcagagttt
gatctcgatatttataagattgttaaaaaggccttgtcaggggcttatcagaatcaagtc
attccgataggttgcaataagtga
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