Polynucleobacter ibericus: AOC20_07910
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Entry
AOC20_07910 CDS
T09789
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03030
DNA replication
piu03410
Base excision repair
piu03420
Nucleotide excision repair
piu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC20_07910 (polA)
03410 Base excision repair
AOC20_07910 (polA)
03420 Nucleotide excision repair
AOC20_07910 (polA)
03440 Homologous recombination
AOC20_07910 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piu03032
]
AOC20_07910 (polA)
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_07910 (polA)
Enzymes [BR:
piu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC20_07910 (polA)
DNA replication proteins [BR:
piu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOC20_07910 (polA)
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AOC20_07910 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC20_07910 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QWE08338
LinkDB
All DBs
Position
complement(1546122..1548953)
Genome browser
AA seq
943 aa
AA seq
DB search
MTKHRLLLVDGSSYLYRAFHAMPDLRNGAGEPTGAIYGMVNMMRRARSELKADHIACVFD
AKGKTFRDEMYSEYKAHRSPMPEDLVKQIEPIHAMVKALGWPVLMVSGVEADDVIGTLAC
QATQAGWETIISTGDKDLAQLVNPSVTLINTMTNEKLDIEGVKEKFGVPPELIVDYLSII
GDTVDNVPGVPKAGPKTANKWLAEFGNLDNLMANADQVKGVVGENLRATLPWLPQARQLI
TVKTDCDLSPHLPSLDDLHAKSEDAPLLRELFERYAFKTWLRDVEKQLTSPEDKDSEPVS
FDLAGSPIANNSEENSGGEKKVRIVANAPTKDLSQATRDSQDAIERHYECVVDEASLEKW
LSKIESSALTAVDTETTSLDALAAELVGISLSVKPGEACYIPVAHRNGEAQLDRDFVLTR
MKSWLESTTHLKVGQNLKYDAHIFANYGITLKGVAFDTLLESYVLESHLPHNMDSLAERH
LGMKTIRYEEVCGKGVHQIGFDQVDLKIATDYAAEDADITLRLHLELWPQIQESPGLLYI
YEKVEMPAMRVLGIMERNGIRIDSALLAKQGQQVGKRLLELEGEIHQLAGQPFNIQSPKQ
IAEILFGQLELPVIKKTPSGAPSTDEEVLQKLAEDYPLPARILDYRSLAKLMSTYIEKLP
RMADPKTGRVHTNFSQATAVTGRLASSDPNLQNIPVRTEEGRRIREAFIPADGCKLLSAD
YSQIELRIMAHIAEDENLLTAFREGKDVHQATAAEIFGIPLDDVNSEQRRYAKVINFGLI
YGMSAFGLAGNLGIERSAAQNYIAKYFDRYPGVAQYMEQTRLEARENGYVETVFGRRLWL
PEIKGSNGPRRQGAERAAINAPMQGTAADLIKLAMIAVEDWLEKEQLKTKMLLQVHDELV
FDVPLDEIELLQAKLPDLMCHVAQLKVPLVVSIGIGDNWEEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatagactcttgttggtagacggctctagctacctctatcgcgccttccac
gctatgccagacctcagaaatggggctggagagcctaccggggctatctatggcatggtt
aatatgatgcgccgagcccgctctgagctcaaggctgaccatattgcctgtgtttttgat
gccaagggcaagactttccgcgatgaaatgtactcggagtacaaggcgcatcgttctcca
atgcccgaggatttagttaaacagattgaacccatccacgctatggtcaaggctttaggt
tggccggtattaatggtgtctggtgtagaggctgatgatgtgattggtactttggcttgc
caagctactcaagcaggttgggaaaccatcatttccactggcgataaagatttagcgcaa
ttggtaaatccttcggtcactctcattaatacgatgacaaatgagaagcttgacattgag
ggtgtaaaagaaaaatttggcgtacctccagaattaatcgttgattatttatccatcatt
ggcgataccgtagataacgtaccaggcgttcctaaggcaggtccaaagacagcaaacaaa
tggttagcagaatttggcaatctcgataacttgatggcgaatgcagatcaggttaaaggt
gttgttggtgaaaacttgcgtgccactcttccttggttgccgcaagctcgtcagctcatt
acagtaaaaacggattgtgatttatccccacatttaccaagcttagacgacttgcatgcg
aaatctgaagacgcgccattacttcgtgagttgtttgaacgttatgcctttaagacctgg
ttacgcgatgtcgagaagcagcttacaagtccagaggataaagactctgagccagtttct
ttcgatcttgcaggcagcccaattgctaataactctgaagaaaattcgggtggagaaaag
aaggtgcgtatagttgctaacgcaccaaccaaagatttatcgcaagcaactcgtgactca
caagatgcaatcgaacgtcattatgaatgtgttgtggacgaagcaagtttagaaaagtgg
ttaagcaagattgagtcttctgcattaacagcggttgatactgaaactactagtcttgat
gcacttgcagcagagctcgttggtatttctttatcggtgaagccaggtgaggcttgctac
attcctgtagcgcatcgtaatggtgaagcacagcttgatcgtgattttgtactcactcgt
atgaagtcttggttagaaagcactacgcatttaaaggtaggccaaaacctcaagtacgat
gcccatatttttgcaaactacggaattaccttaaagggcgttgcattcgacacattgctg
gaatcatatgtgctcgaatctcatctcccgcacaatatggatagcctggctgagcgccat
ctgggcatgaaaacgattcgctacgaagaggtgtgtggcaaaggcgttcaccagattggc
tttgatcaagttgatctcaaaattgcaacggactacgcggcagaagatgctgacattacc
ttgcgtctccatttagagctttggccgcagattcaggagagtccgggactgctctatatc
tatgaaaaagtagagatgccggccatgcgggttctcggcattatggagcgtaatggcatt
cggattgattcggcgctgttggcaaaacagggacagcaagtcggtaagcgtctgctggag
ctggagggggagattcatcagttagctggtcagcctttcaatatccagtcacccaagcaa
atcgcagaaattttatttggtcagcttgagttgccagtgatcaaaaagacaccatcaggc
gcgccttcgactgatgaggaagtattgcagaagttggctgaagactatcccttacctgca
cgtattttggattaccgcagcttggcaaagttgatgtctacttatatcgagaagctcccc
cgcatggctgatcctaagactggtcgcgtacatacaaacttctctcaagctactgcagtt
acgggccgactggcttcgagcgatcctaacttacaaaatattccggtgcgtacagaagag
ggccgccgcattcgtgaagcatttattccagctgatggctgtaagcttttgtccgcggat
tattcccaaattgagttgcggatcatggcgcatattgctgaagatgaaaacctcttaacg
gcatttagagaaggcaaagatgttcaccaagccactgccgcggagatctttggtattcct
ttggatgatgttaattctgagcagcgtcgctacgccaaagtcattaactttggactgatc
tatggcatgagtgcttttggtttggctggtaatctaggtatcgaacgctctgctgcccaa
aactatattgccaaatactttgatcgctatccaggggttgctcaatatatggagcagact
cgtctcgaggcaagagagaatggatacgtggaaaccgtcttcggccgccgtctttggtta
ccagagattaaaggctcgaacgggccacgtcgccaaggcgctgaacgtgccgctattaat
gctccaatgcaaggtactgccgcagacttaatcaagttagcgatgattgcggtggaagat
tggttggaaaaagaacagttaaaaaccaaaatgctccttcaggtacatgatgaattggtg
tttgacgttcctttggatgagattgagctactgcaggctaagttgccggatttgatgtgc
catgttgctcaactaaaggtgcctttagtggttagtattgggattggcgataattgggaa
gaagcacattaa
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