Polynucleobacter ibericus: AOC20_08165
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Entry
AOC20_08165 CDS
T09789
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOC20_08165 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
piu03019
]
AOC20_08165 (pcnB)
Enzymes [BR:
piu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AOC20_08165 (pcnB)
Messenger RNA biogenesis [BR:
piu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AOC20_08165 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QWE08384
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All DBs
Position
1599952..1601352
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AA seq
466 aa
AA seq
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MITKFIKRILRRDPMVKHTQANNTGAPKRIPKKSHRIDPHLLSKNAVKVTHTLQQAGYEA
FIVGGAVRDLALGISPKDFDVATNATPDQVQRLFRKARLIGRRFQIVHVTFFGKGHPEII
EVSTFRALLDNAGDHVAESGRILRDNVWGSQGEDAARRDFTINAMYYDPSSETVLDYHGG
MADMQKKTLRMIGDPAKRYREDPVRMLRAVRFAAKTGFELDAATRAPIAKLGTLLNDVPS
ARLFDEILKLLMSGYSWKAIQGLKDAGLHHGLLPLLDHILDKGEDSKGANNFVKLALANT
DDRIQSGKSVSAGFLFATLLWPDLLKNWKANSAKGMANIPALHDAMDDTIATQSSGMTIQ
RRFESDMREIWSMQPRFERRVGRYPFRLIESPRFRAGYDFMLLRCATGELNSAIGQWWTD
FIAADPTGQEELMASVKNESGNNTSPAKRRRRRKPKSAAPPESAAS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcactaaatttattaaacgtattttgcggcgcgacccgatggtcaagcacacccaa
gcgaacaatactggcgctccgaaacgcattcctaaaaaatcacatcggattgatccgcac
ttgctttccaagaacgcagtaaaggtaacccatacattgcaacaagcaggctatgaggca
tttattgtggggggcgccgttagggatcttgctcttggtattagcccaaaagattttgat
gttgctactaacgctacgcccgatcaagtgcaaagactctttcgcaaggcacgcctgatt
ggtcgccgctttcagattgtgcatgtcaccttttttggcaaaggtcatcctgaaatcatc
gaagtatccaccttcagagctctactggataacgcaggagatcatgtggctgaaagtggt
cgaatcctacgcgacaatgtgtggggctctcaaggtgaagatgccgccagacgtgacttc
acgatcaatgcaatgtattacgatccctcctccgaaactgttcttgactatcacggcgga
atggcagacatgcaaaagaagaccttgcgcatgattggcgaccctgctaaacgctatcgc
gaagatcctgtacgcatgctcagagctgtgcgttttgcagctaaaacgggttttgaatta
gacgctgctacacgcgctccgattgcaaagctaggcactctattgaacgatgttccttca
gccagactctttgacgaaattctcaaacttttgatgtcaggctactcctggaaagcaatc
caaggactaaaggatgccggacttcatcatggactgctgccactgcttgatcacatccta
gataagggcgaagattctaaaggggctaataacttcgtaaagcttgctttagccaacacc
gacgatcgtattcagtccggcaaaagtgtttctgctggatttttatttgccaccctactt
tggcctgatctactgaagaactggaaagccaactccgccaaaggtatggctaatattccc
gccttgcacgatgcgatggatgacacgattgccacccagagcagcggcatgaccattcaa
cgccgctttgaaagcgatatgcgcgagatttggtccatgcaaccccgctttgagagacgc
gtaggtcgttaccccttccgcctgattgaatcccctcgtttcagagcgggttatgacttt
atgttgctacgctgcgcaactggggagctgaattcagctattggccaatggtggacagac
ttcatcgcggctgatcccactgggcaggaagagctgatggctagcgtcaaaaatgaatct
ggcaacaatactagccctgccaaaagaaggcgccgtagaaagccaaaatcagcagcgccc
ccagagagtgcagcaagctaa
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