Polynucleobacter ibericus: AOC20_08685
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Entry
AOC20_08685 CDS
T09789
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
piu
Polynucleobacter ibericus
Pathway
piu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOC20_08685 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piu03400
]
AOC20_08685 (ruvB)
Enzymes [BR:
piu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOC20_08685 (ruvB)
DNA repair and recombination proteins [BR:
piu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AOC20_08685 (ruvB)
RecFOR pathway proteins
AOC20_08685 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
AAA_22
Rad17
AAA_14
AAA_3
NTPase_1
DUF815
AAA_18
TsaE
RNA_helicase
AAA_33
AAA_17
AAA_24
Sigma54_activ_2
Bac_DnaA
ABC_tran
AAA_28
NACHT
NB-ARC
IstB_IS21
bpMoxR
AAA_25
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QWE08481
LinkDB
All DBs
Position
1715604..1716674
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AA seq
356 aa
AA seq
DB search
MAIHTDDLSSIPEDLPEGNDRIVSGSAGNAEAVFERALRPKQLDEYVGQTKARAQLEIFI
TATRARQEALDHVLLFGPPGLGKTTLAHIIARELGVNLRQTSGPVLDRPGDLAALLTNLE
ENDVLFIDEIHRLSPVVEEILYPALEDYSLDIMIGEGPAARSVKIDLKPFTLIGATTRAG
MLTNPLRDRFGIVARLEFYTTEELTKIINRSASLLKADIDPDGSVEIAKRARGTPRIANR
LLRRVRDYAEVKGTGTITKAMADAALKMLDVDPSGFDVMDRKLLEAILHKFDGGPVGIDN
LAAAIGEERDTIEDVLEPYLIQQGYLQRTSRGRVATRQAYEHFGLTPPSGSASLDI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcatacagacgacctaagctcaattcctgaagatttaccagagggcaatgac
cgcattgtgagcggctcagccggcaatgctgaggctgtctttgaaagagcattacgtccc
aaacaactcgatgagtatgttggtcaaactaaagctagggcgcaattagagatttttatt
accgccacaagagcacgccaagaggctttggatcacgttttgctctttggtcctcctggg
cttggtaaaaccacactcgcccacattattgcgagagaacttggggtcaacttacgtcaa
actagcggacccgtcctagatagaccaggcgaccttgctgccttgctaaccaatttagaa
gaaaacgatgttctctttattgatgagattcatcgcctctctccagtagtagaagaaatt
ctgtacccagcgctggaagactacagcctagacatcatgatcggcgaaggtcctgcagca
cgtagtgtaaaaattgaccttaagccattcacgctgattggtgcaactactcgtgctggc
atgctaaccaatccattacgtgatcgttttggcattgtggccagacttgagttctacacc
accgaagagctcaccaaaattattaatcgttcagccagcttgctcaaggcggatattgat
ccagatggctcggttgaaattgcgaaacgtgcacgtggtactccacgtatagctaatcgc
ctactcagaagagtgcgtgactacgcagaagtcaaaggcacaggcacgattaccaaagct
atggccgatgctgcactcaaaatgctagatgttgatccaagcggctttgatgtaatggat
agaaaattgctggaagccatcttgcacaagtttgatggtggcccagtaggtattgataat
ttggcagcagccattggtgaagaacgcgacacgattgaggatgttctagaaccctatttg
attcaacagggctacctacaaagaacctctcgtggccgtgtggcaacccgccaggcctat
gagcactttggtttaacgccgcccagcggcagcgctagcctagatatttaa
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