Aedoeadaptatus ivorii: NCTC13079_00493
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Entry
NCTC13079_00493 CDS
T06636
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
piv
Aedoeadaptatus ivorii
Pathway
piv03420
Nucleotide excision repair
piv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
piv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13079_00493 (pcrA_1)
03430 Mismatch repair
NCTC13079_00493 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piv03400
]
NCTC13079_00493 (pcrA_1)
Enzymes [BR:
piv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13079_00493 (pcrA_1)
DNA repair and recombination proteins [BR:
piv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13079_00493 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC13079_00493 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
VEJ35072
UniProt:
A0A3S4ZQ45
LinkDB
All DBs
Position
1:complement(481953..483818)
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AA seq
621 aa
AA seq
DB search
MKLTDEQKKAISHDKGPALVLAVPGSGKTTMLLSRTKRLIEAGEDPVRILTITFSRAAAK
DMQLRYRKLFYEEPAPSFSTIHSFCFSVLKNYERRSGIRYTLIETAQNIGKWRILADLWR
EYLHRSPNDEQLETLIGEIGYVKNKMLDPDAYQKQARSPLFTKFYRGYESLKRSRNWIDF
DDMIALCPEIFQKDPGLLRAIRRSYDYVQLDEGQDTSRGQLAIVDAVLGAEKNLFVVADD
DQSIYGFRGADFQGLMSLKDRYQNLKIYYLSRNFRSTESIIAASTRFIEQNKKRYSKDVH
AVRESGVALRYVELDDLKRQYAFIASEIQKHDLKDVAMLYRNHISAVGCAEYFERKNIAF
SMREGKIRFLRHRVVKDLLEIVRFAQDPRDLESFSHIYYKIRGYISKKMVEDLARRGVSV
SVFDTMLEGKLPDYMRRDLQALRRDFMYLAGLPLAEAFRFIQKDLEYEKYLENHANTFGS
SKTAAMRILYYAKFIAKNCADADAFMARLQALDRLLSGGGAKEPGIVLSTLHGAKGLEFD
AVFLIDLNEDVIPARAASDAHPHEVERLLEEERRLFYVGMTRARHRLYFLRPRRIDREVA
SPSPFFTWAKEDILRQRKNRS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccgatgaacagaaaaaggcgatctcccacgacaaaggtcccgccctggtc
ctcgccgtgcccggaagcggaaagacgacgatgcttctaagccgcaccaagagactgatc
gaagcgggtgaggatccggtgcgcattcttacgataaccttttcaagggccgccgccaaa
gatatgcagctccgctaccgcaagctcttctatgaggaaccggcgccgtctttttccacc
atccacagcttctgcttttcggtgctgaaaaattacgagcgccgctcgggcattcgctac
accttgatcgaaaccgcgcaaaacatcgggaagtggcgcatcctcgccgatctatggcga
gagtatctgcaccgaagccccaacgacgagcagctggagaccttgatcggagaaatcgga
tacgtcaaaaataaaatgctcgaccccgacgcctatcagaaacaggcgcgcagtcccctc
tttacaaaattttaccgaggttacgaatcgctcaagcgcagccgcaactggatcgacttc
gacgatatgatcgccctttgccccgaaatttttcaaaaggatccgggcctcttgcgcgcc
attcgtagatcctacgactatgtacagctcgacgaaggccaggatacatcgcgcggtcag
ctcgccatcgtcgatgccgttttgggagcggaaaaaaacctcttcgtcgtcgccgacgac
gaccagtcgatttacggctttcggggcgccgactttcaaggtctcatgtcgctgaaggac
cgctatcagaatctgaagatctactatctgtcccgcaattttcgctcgacggaatcgatt
atcgccgcctccacccgttttatcgaacagaataaaaagcgctattcgaaagacgtgcac
gccgtacgggaaagcggcgtcgcgcttcgctatgtggagctcgacgatctcaaacgacaa
tacgcctttatcgcatccgaaattcaaaaacacgacctcaaggacgtggcgatgctctat
cgcaaccatatctccgccgtgggctgtgcggaatacttcgagcggaagaatatcgccttt
tcgatgcgcgagggcaagatccgatttttgcgccaccgcgtcgtaaaggatctcttggag
atcgtgcgctttgcccaagaccctcgcgatctcgaatcgttctcgcatatttactataaa
atccgcggctatatttccaagaaaatggtggaggacctcgctcgccgcggcgtttcggta
tcggtcttcgacaccatgctcgaaggaaagctccccgactatatgcggagggacctccaa
gcgctacgccgcgactttatgtatctcgcgggccttcccctcgccgaagcctttcgattt
attcaaaaggatctggaatacgaaaagtatttggaaaaccacgccaatacctttggctcc
tccaaaaccgccgccatgcgcattctctactacgcgaaatttatcgccaaaaactgcgcc
gatgcggacgcctttatggcccgcttgcaggcgctggaccgtctgctttcgggcggcggt
gccaaggaaccgggcatcgtgttgagcacgctgcacggcgccaaggggttggaattcgat
gcggtatttctgatcgacttaaacgaagatgtaatccccgcccgcgccgcatcggacgca
catccccacgaagtggagcgcctgctcgaagaagagcgtcgcttgttttatgtgggcatg
acccgggcgcgccatcgcctctattttctcaggcccaggcgcatcgaccgggaagtggcg
agcccctcccccttttttacctgggcaaaagaagacatattgcggcaacgaaaaaaccgg
tcttaa
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