KEGG   Aedoeadaptatus ivorii: NCTC13079_00623
Entry
NCTC13079_00623   CDS       T06636                                 
Symbol
yddM
Name
(GenBank) Uncharacterized HTH-type transcriptional regulator YddM
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
piv  Aedoeadaptatus ivorii
Brite
KEGG Orthology (KO) [BR:piv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:piv03000]
    NCTC13079_00623 (yddM)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:piv02048]
    NCTC13079_00623 (yddM)
Transcription factors [BR:piv03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    NCTC13079_00623 (yddM)
Prokaryotic defense system [BR:piv02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    NCTC13079_00623 (yddM)
SSDB
Motif
Pfam: HTH_3 Peptidase_M78 HTH_26 IF2_N HTH_31 HTH_19 Portal_Mu DUF6094
Other DBs
NCBI-ProteinID: VEJ35311
UniProt: A0A3S4Y6X3
LinkDB
Position
1:617189..618235
AA seq 348 aa
MISKNYIAIPPGATIKEQLEDRGMIQRDFASRMNLSEKHVSKLINGQSQLTQDVAYRLEM
VLGIPASFWNNLESIYRQNLTKVEKENEMDQDIEISRKISYNEISKLGWIEETRKPKERV
VNLRKFFEITTLELLAENAPMQIACRKLNEANKEDLNLLVWAQKAKLEARNIPVKPINID
GLKRSLNEIRALTTSKDSHFSIDLQQKLANLGIALVYLPHLPGSFLHGATFYDSKKIVIG
LTLRGKDADRFWFSLFHEIGHIILGHINDNLGLTEHHEYEADVFARDILIPPDEYDLYIQ
NHDIGYDTVKNFAEKINISPGVVVGRLQKEGKIGYNQLNDLKIRYDFN
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgataagcaaaaattatatagcaattccgcctggcgctaccattaaagagcaacttgaa
gacagaggtatgattcaaagagattttgcatctcgcatgaacctatcggagaagcatgta
tctaaattaattaatggacagtctcaactaacccaagacgttgcttatcgtttggaaatg
gtactagggattcccgcaagtttctggaataatttagagtccatctatagacagaacctt
acgaaggttgagaaagaaaacgaaatggatcaagatatagagatttcaagaaaaatatca
tataatgaaatctctaaattaggttggattgaagaaactagaaagccaaaagagcgtgtt
gttaatctcagaaagttttttgagattacaactttagaattgcttgctgaaaacgcacct
atgcaaattgcgtgtagaaaattaaatgaagccaacaaagaagatcttaatttgttagta
tgggctcaaaaggctaaattagaagctaggaatataccagttaaaccgattaatatagat
ggtttaaaacgaagcttaaatgaaattagggcgttaacaacttctaaagattcgcacttt
agtatagatcttcaacaaaaattggcgaaccttgggattgcgctggtttatttgccgcat
ttaccgggctcttttcttcatggcgctacgttctacgattccaaaaaaatcgttatcggt
ttaacgttacgaggtaaagatgcagacaggttctggtttagtctatttcatgagataggc
catatcatactaggacacattaatgataatttgggattaaccgaacatcatgaatacgag
gcagatgtttttgccagagatatcttaattccgccggatgaatatgatctctatattcaa
aaccatgatattggttatgacaccgtaaagaattttgcagaaaaaattaatatctcaccg
ggggtggttgtaggtagattgcaaaaagaaggaaaaatcggttataatcagttgaatgat
ttgaagattaggtatgatttcaattaa

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