Aedoeadaptatus ivorii: NCTC13079_00754
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Entry
NCTC13079_00754 CDS
T06636
Symbol
ypfD
Name
(GenBank) 30S ribosomal protein S1 homolog
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
piv
Aedoeadaptatus ivorii
Pathway
piv00900
Terpenoid backbone biosynthesis
piv01100
Metabolic pathways
piv01110
Biosynthesis of secondary metabolites
piv03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
piv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NCTC13079_00754 (ypfD)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NCTC13079_00754 (ypfD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
piv03011
]
NCTC13079_00754 (ypfD)
Enzymes [BR:
piv01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
NCTC13079_00754 (ypfD)
Ribosome [BR:
piv03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NCTC13079_00754 (ypfD)
Bacteria
NCTC13079_00754 (ypfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
PFK
Motif
Other DBs
NCBI-ProteinID:
VEJ35567
UniProt:
A0A3S5AJ79
LinkDB
All DBs
Position
1:732998..735070
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AA seq
690 aa
AA seq
DB search
MEILLSESYGFCGGVKRAVNLAFETAREYENVKILGELVHNAAVNEKLRDAGVEEIDTER
LPENATVITRSHGIPKELKAQLVERGNEVVDTTCPFVARIYRIAEDIQESSIPVVLVGDP
NHPEIQGIVSYGEEIYVVTKPEEVDALPLEGKSKIALISQTTNPRKNVDMVEDRLKGVFT
GEILRYNTICEATNDRQKACRNLAKNVDCMLVIGGKNSANTIKLAKIAAEHCKNVYHIQT
INQLDLRPFKKFNKIGITAGASTPDSVIKEAVSRMDNFSRDEMNNEMMEAIENSFTRVRR
GEIVDGEVLYVTDNEVMVNIGYRADGIISRDELSNDPNVKPEELFQQGDEIQVYVMKMDD
GDGNVVLSYKRVENMKVWDEMEEKFENGEIVTAHVTNVVKGGLTCEVDGLNGFIPASHAS
VRFQRDLSKYVDQDLECEIIDFDKGRRKFVLSRKNVEAKEIEEKRKEVYSTLEEGEFIEG
TVQRLTNFGAFVDVGGVDGLIHISELSWNRVKHPSDVVSPGEKVKVLVLKIDEEKNRIAL
GLKQTTKKPWDEFIETVSVGDDVKGTVVNILDFGAFVRLESGVDGLLHVSQISRQHVEKP
SDVLEIGQEIEVRVTDINYDDKKISLSMKALQPGGEDEPAGGQRPKRDQKPRRKDRPQAE
SKPEEENFSMAIGDLINFDELEASEDHSEE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatcttgctgagtgagtcttacggtttttgcggcggcgtaaagcgcgctgtaaat
ctcgcctttgagaccgctcgggaatacgagaatgtaaagatcttgggcgagctggttcac
aatgccgccgtcaacgaaaaactacgcgacgcaggggtcgaggagatcgacaccgagcgc
ttgcccgaaaatgcgacggtgatcaccagaagccacggcatcccgaaggaactgaaagcg
cagctcgtcgaaaggggaaacgaagtggtcgatacgacctgtccctttgtggcgcggatc
taccgcatagcggaagatatacaagagtcgtcgattccggtggtcttggtgggcgatccc
aatcatcccgagattcagggcatcgtaagttacggcgaagagatctatgtcgttacaaag
ccggaagaggtggatgcgctgcccctcgagggaaaaagtaagatcgcgctgatttctcag
acgacaaacccccgaaaaaacgtagatatggtggaagatcgcctaaaaggtgttttcaca
ggcgagattttaaggtataataccatatgtgaagccacaaacgaccgccaaaaggcgtgt
cggaatttggctaaaaatgtggattgtatgctcgttataggtggtaagaatagtgcgaat
acgataaagcttgcaaaaattgcggccgaacattgtaaaaatgtctatcacattcaaacc
ataaatcaactcgatctacgtccatttaaaaaatttaataaaattggtattaccgccggg
gcatccactccggattcggtaatcaaggaggctgttagtagaatggataactttagcagg
gatgaaatgaacaatgaaatgatggaggccatcgagaactcctttacgcgcgtacgtcgc
ggcgagatcgtcgatggagaagtcctctacgtaaccgacaacgaagtcatggtcaacatc
ggttaccgtgcggacggcattatctccagagatgaattgtccaacgatcccaatgtgaaa
cccgaagagctcttccaacaaggagacgaaattcaggtttatgttatgaaaatggacgat
ggagacggtaatgtagttttgtcctataagcgtgtggaaaacatgaaggtatgggacgaa
atggaagaaaaattcgaaaacggtgagatcgttacggcgcacgttaccaacgtcgtcaag
ggcggactcacctgcgaagtcgacggactgaacggttttattcccgcatctcacgcatcg
gttcgcttccaaagagatctcagcaagtatgtagatcaggatttggaatgcgaaatcatc
gatttcgacaagggcagaagaaaattcgtcctttcccgtaaaaacgtcgaagcaaaggaa
atcgaagaaaagcgcaaggaagtttacagcactttggaagaaggcgaatttatcgaaggt
accgtccaaagactgaccaacttcggcgcattcgtcgacgtcggcggcgtagacggtttg
attcacatctccgaactttcctggaaccgcgtcaagcaccccagcgacgtggtcagcccc
ggagaaaaggtaaaggttttggtcctcaagatcgacgaagagaaaaaccgcattgccttg
ggtctgaaacaaaccaccaaaaagccctgggatgagtttatcgaaaccgtaagcgtcggc
gacgacgtgaagggtaccgtcgtcaacattctcgactttggcgcgttcgttcgactcgaa
tccggcgtagacggtttgctgcacgtgtctcaaatctccagacaacacgtggaaaaaccc
tccgacgtcttggaaatcggacaagaaatcgaagtccgcgttaccgacatcaactacgac
gacaagaagatctccctgtctatgaaggcattgcaaccgggtggcgaagacgaacccgca
ggcggccaaagacccaagagagatcaaaagccccgtcgcaaagaccgtccgcaagcggaa
agtaaaccggaagaagaaaacttctccatggccattggagatcttatcaacttcgacgaa
ctggaagcctcggaagatcatagcgaagaataa
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