Aedoeadaptatus ivorii: NCTC13079_00798
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Entry
NCTC13079_00798 CDS
T06636
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
piv
Aedoeadaptatus ivorii
Pathway
piv03030
DNA replication
piv03430
Mismatch repair
piv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
piv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13079_00798 (polC)
03430 Mismatch repair
NCTC13079_00798 (polC)
03440 Homologous recombination
NCTC13079_00798 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
piv03032
]
NCTC13079_00798 (polC)
03400 DNA repair and recombination proteins [BR:
piv03400
]
NCTC13079_00798 (polC)
Enzymes [BR:
piv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13079_00798 (polC)
DNA replication proteins [BR:
piv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13079_00798 (polC)
DNA repair and recombination proteins [BR:
piv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13079_00798 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
RNase_H_2
DUF655
HHH_3
Zn_ribbon_8
DEDDh_C
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
VEJ35636
UniProt:
A0A3S4YPH1
LinkDB
All DBs
Position
1:776517..780698
Genome browser
AA seq
1393 aa
AA seq
DB search
MLNRNIKVNKIVYAPDRAEIVCYSESVDDDSQRFSDLMTRCFSGVSIRMHHEQTPEAVPV
KDLSSEDILEFLRGRIASSQAWLDANSCKIEKDSITLRVPNVTMERNIAALSLEAELEKI
SGHSYRICCKVEEAEAEIEALCSQMDDEESEFCARYQAEAAKFEKQEAAQIEENYIFGKD
NFDAPMPLSDCRGGETVTVAGQVFQTDRRNIKNNKTLFILSIYDGSDSRNVKAFVKDEEA
DAFAAHFKTGADILVRGKFEYDSFDRNESIMARSIKNIFVERRTDTAPEKRIELHLHTKM
SNMAGCESIGAFARRAKEWGHSAIAITDDNVVQGYPDAMQAAKKHDMRILYGIDADIVDD
KEKIFKNPDGVRHDLSYIVFDLETTGFSPRFDEITEIGAVKIEKGRIVSRFSTFVNPGRP
IPEKIVELTGITDDMVKDAPKIDEILPEFEFFIGEGILVAHNATFDSRFLEFRRPEKPRY
ATIDTLLLSQCLPISVKNYKLGTLAKRFGISLNGAHRAVNDAEATAELFLELQKLAAREG
VDAPESYEELYHPHPERLFPTKLTLFPKNLEALTELYRLVSDSHTKTFFRTARIPRSKLE
AVREDFIVGSGGESGELIDAYLRGASDAELKDHIRRCDYVEVSPPPRYRKAYFDGLLQSQ
ADAEEMICHILRLADAEGVPVVASSDVRYMDPDDYLYFEILKHAKFSGRAMGNSHAYFMT
TDEMLAAFDFLGQETAHRIVIENPFDIVSAIEEIQPIPSGKFPPKIQNADVDLRNDTYKR
AREIYGDPLPEIVEQRLEKELTSIIGNGYAVMYRIAQKLVKKSNDDGYYVGSRGSVGSSL
VATMTGITEVNPLSPHYVCPDCGFSDFSVEESISSGFDLPKRNCPECGAPLRRDGHKIPF
EVFLGFYGDKEPDIDLNFAGEYQPTAHKFIEDSFGEGFVFRAGTIGTLAEKTAYGFVRKY
LEENNILKNPIEIQRLAKGIEGVKRTSGQHPGGIMIVPKDEDIHHFSPIQFPADDAKKNV
ITTHFDYHSISENILKLDILGHDAPTILRMLEDLTHTHMEDAEITDPAVKGLFLSAEGLG
MDEDVFTCQTGTLGIPEFGTNFVVRMLLETKPDSFGSLVNISGLSHGTDVWTGNAQELVN
SNRASISEVISTREDIMNYLIRAGAENKVAFDTMEAVRKGRGIPEKYADILHSLKLPEWY
LESCQKIQYMFPRAHAVAYVLTSLRIAWYKVHYPLAFYAAYFTTKLSDLNGEVILSGSEG
VKRRMQAIEALNFEATKKEKDEFQLLRSVMEMFARGYEFAPILLEKSHHRKFLIEDGKIL
PPFGALPGVGETVAREIYRERKQAPFLSVEDLVSRTGASKTVVEMLSAHGVLDGIPKDNQ
LSMLDIIGGMAKM
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatagaaacatcaaagtgaataagatcgtctacgctcccgatcgcgcggaaatc
gtctgttatagcgaatccgtagacgacgattcgcagcggttcagcgatctgatgacccgc
tgtttttcgggtgtatcgattcgaatgcatcatgaacagacacccgaggccgtccccgtc
aaagacctctcttccgaagatatattggaatttttgcgggggcgcatcgcttcttcgcag
gcttggctcgacgcaaacagctgcaaaatcgaaaaagacagcattaccctccgcgtgccg
aatgttaccatggaaagaaatattgccgccctctctttagaagcggaactggagaaaatc
agcggccattcctatcggatttgttgcaaagtggaagaagcggaggcggagatagaagca
ctgtgttcgcagatggacgacgaggagtccgaattctgtgcgcgctatcaggcggaggcg
gcaaagtttgaaaaacaagaagccgctcagatcgaggagaattatatcttcggcaaggac
aatttcgacgcacccatgccgctttcggattgtcgaggcggagaaactgtgaccgtagcg
ggacaggtgtttcaaacggatcgccgcaatatcaaaaacaacaagacgctttttatatta
tcgatctacgatggaagcgacagccgcaatgtaaaagcctttgtcaaagacgaagaagcc
gatgcgtttgccgcgcattttaagaccggtgcggacattctcgtgcgcggaaaattcgaa
tacgacagttttgaccgcaacgagagcattatggcgaggagtataaagaacatcttcgta
gaacggcgcaccgacacggcacccgaaaagcggatcgagctacatctgcacaccaaaatg
agcaatatggcgggctgtgaaagtatcggcgcctttgcccgtcgcgcaaaggaatggggc
cacagtgccatcgcgatcacagacgacaatgtggtccagggctatcccgatgcgatgcag
gcagccaaaaaacacgatatgcgcattctctatggcatcgatgccgatatcgtcgacgac
aaagagaaaatttttaagaatccggacggcgttcgacacgatctaagctatatcgtcttc
gacttggagacgacgggtttttctccgcgcttcgacgaaattacggagatcggcgccgtg
aaaatcgagaagggacgaatcgtctctcgattttcgacatttgttaatcccggacggccg
atcccggaaaagatcgtcgaattgacgggcatcaccgacgatatggtaaaggatgcgccg
aagatcgacgagatcttgccggaatttgaattctttatcggcgaagggatcttggtcgcc
cacaatgccacctttgactcgcgctttttggaatttcgacgtcccgaaaaaccgcgctat
gcgaccatcgatacgctcttgttgtcccaatgccttccgatttctgtaaaaaactacaaa
ctcgggaccctggcaaagcgcttcggcatctcgctaaacggcgcccaccgcgccgtcaac
gacgccgaggcgacggcggagctgttcttggaattgcaaaaactcgccgcccgagaaggc
gtagatgcaccggagtcgtatgaagaactctaccacccccatccggagcgcctttttccg
acaaaactgacccttttccccaaaaatttagaggcccttaccgaactgtaccgattggtc
tcggattcgcacacaaagacgtttttccgcacggcgcgcatcccgcgctctaaattggaa
gccgtacgggaggatttcatcgtaggcagcgggggagaaagcggagaactcatagatgcc
tatctgcgcggcgcctcggacgcggaattgaaggatcacattcgccgctgcgattatgtc
gaagtttccccgccgcctcggtatagaaaagcctatttcgacggtctgctccagtcacag
gcggatgcggaagagatgatttgccacattttgcgtcttgccgatgcagaaggcgtaccc
gtcgtcgcctcctccgatgtgcgctatatggatccggatgattatttgtattttgagatc
ttgaagcacgcaaaatttagcggccgggcgatgggcaattcccatgcctattttatgacg
acggacgaaatgctcgcggcttttgattttctggggcaggagacggcgcatcggatcgtg
atcgaaaatcctttcgacatcgtctcggcaatcgaagaaatccaaccgatcccttcgggt
aaatttcctccgaagattcaaaatgccgatgtcgatttgcgcaacgatacctacaaacgg
gcgcgggaaatctacggcgacccgctgcccgaaatcgtcgaacaaaggctcgagaaagaa
cttaccagtatcatcggaaacggctatgccgtgatgtatcgcatcgcccaaaagctcgtc
aaaaaatccaatgacgacggatattatgtgggttcgcggggatcggtcggttcctctctc
gttgcgacgatgacgggcattaccgaagtcaacccgctttcgccgcactatgtctgtccg
gactgcggatttagcgatttttcggtggaggagagcatcagttccggtttcgatctgcca
aagagaaactgtcccgaatgcggcgcgcccttgcgacgggatgggcacaaaatccccttc
gaagtctttttgggcttctatggcgataaggaaccggatatcgacttgaactttgccggg
gaataccaacccacggcgcacaagtttatcgaagacagtttcggcgaaggctttgtgttc
cgcgccggcaccataggcactttggcggagaagaccgcctacggtttcgtgcggaagtat
ctcgaagagaataatatcctcaaaaatcccatagaaattcaacgcctcgccaagggcatc
gaaggggtcaagcggaccagcggacagcaccccggcggcattatgatcgtgcccaaagac
gaagacattcaccatttttcgccgatccaatttccggcggacgatgcgaagaaaaacgtg
attaccacgcatttcgattaccattccatcagcgaaaacattttgaaactcgacatcctc
ggccacgacgcgccgacgattttgcgcatgttggaagatcttacgcatacgcatatggaa
gatgccgaaatcaccgaccccgcggtgaaggggctgtttctttccgcagagggtctgggg
atggacgaagacgtcttcacctgccagacggggactttgggaattccggagttcggcacg
aacttcgtcgtgcgaatgctactggagaccaaacccgacagcttcggttctctcgtcaat
atttctgggctttctcacggcacggacgtgtggaccggcaatgcccaggagctggtgaat
agcaaccgagcgagcatttccgaagtcatcagtacccgagaagacattatgaactacctg
attcgcgcaggggcggaaaacaaagtcgccttcgataccatggaggcggttcgaaagggc
cgcggcattccggaaaagtatgcggatatccttcattctctgaaattgccggaatggtat
ctggaaagctgccaaaaaattcagtatatgttcccgcgcgcccacgccgtcgcctatgtg
ctcaccagtctgcggattgcctggtataaggtgcattacccccttgccttttatgcggcc
tactttaccacgaagctttcggatctgaacggcgaggtaattttaagcggatcggagggg
gtcaaaaggcgcatgcaagccattgaagcgctgaattttgaagcgaccaaaaaagaaaag
gatgaatttcaactgctgcgctcggtcatggagatgtttgcgcgggggtatgaatttgct
ccgattctgcttgagaaatcccatcacaggaagtttttgatcgaagacggaaaaattctt
ccaccattcggcgcattgcccggcgtcggcgaaaccgtagcccgggaaatctatcgggaa
agaaagcaggcgccgtttttgtcggtagaggatctcgtatcccgtaccggcgcttcgaag
acggtcgtcgagatgctttctgcccacggcgtactggacggaatcccgaaagacaatcag
ttgagtatgctcgatatcattggcggcatggccaaaatgtga
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