Aedoeadaptatus ivorii: NCTC13079_00819
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Entry
NCTC13079_00819 CDS
T06636
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
piv
Aedoeadaptatus ivorii
Pathway
piv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
piv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13079_00819 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
piv03019
]
NCTC13079_00819 (rny)
Messenger RNA biogenesis [BR:
piv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC13079_00819 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
dUTPase
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
VEJ35657
UniProt:
A0A448V1Q3
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All DBs
Position
1:801293..802837
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AA seq
514 aa
AA seq
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MPEIVISILVALFIGILGVAIGYFVRKNLAEGKLNRAEELAKNIIIDAEREAENNKRDVM
LHAKEEIHRLRDSVQQENNARKTELQKLEERLLSKENILDSKSLTLEKKEAQIFEQQTRI
QEKENSIDALIEEKTAEIQRVSGLTREEAKQLLLNELESELTQEAAVRIRDYERHVKDES
RKLAQDIIVRTIQRIAADQVAETTVSVVTLPNDEMKGRIIGREGRNIRAIEALTGVDLII
DDTPEAVVISSFNPIRREIARVALEKLVLDGRIHPTRIEETVEKAKQEVDEIIKESGEEA
TFEAGVHGLHPELVKYLGRLKFRTSFGQNCLQHSVEVSKIAGYLAEEIGIDSKLAKRAGL
LHDLGKSIDHEVEGPHVELGVELARKYKEPEAVINGIEAHHGDVEFDSLESILVQAADAI
SAARPGARRETIETYIKRLEQLEEIATGFEGIEKSFAVQAGRELRIIVKPEEIDEAHMTL
TARKIAKEIESQLDFPGQIKVNVIRETRATEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaaattgtcatttcaattctcgtggcattgtttattggaatcctcggggtagct
attggttatttcgtacgtaagaatttagcggaaggaaagttaaatcgagctgaagaatta
gccaagaatatcattattgatgcggaacgtgaagccgagaacaataaacgggacgtgatg
ctccatgcgaaggaagagatccatcgcctgagagacagcgtgcaacaggaaaataatgct
agaaaaacggagctgcagaaactcgaagagcgtcttttgtctaaggaaaatatcttggat
tccaagagcctgactttagaaaaaaaggaggcccaaatctttgagcaacagacgcgcatc
caagagaaagagaattccatcgacgccttgatcgaggaaaagacggcagaaattcaacgg
gtctcgggccttaccagagaagaagccaaacagcttctcctcaacgaactggaaagcgaa
ttaacccaagaagctgccgtgcgcattcgcgattacgaacgccatgtgaaggatgaaagt
cgcaaattggcacaggatatcatcgtgcgcaccattcagcgcatcgccgccgatcaggtg
gctgaaactacggtatcggtggttacattgcccaacgacgagatgaagggccgcattatc
ggacgggaaggacgaaatattcgcgccatagaggccttgaccggcgtcgatctgattatc
gacgatacgccggaggcggtcgtaatctcttcctttaatcccattcgacgtgaaatcgcc
cgtgtcgcgttagaaaaattggtcctcgacggcagaattcatcccacgcggatcgaagaa
accgtcgaaaaagccaagcaggaagtcgacgaaatcatcaaagaaagcggcgaggaagct
acatttgaagccggcgtgcacggcctgcacccggaactcgtaaaatacctggggcgtctg
aagttccgtacgagctttggacaaaactgtctacagcattccgtcgaggtttctaagatc
gccggatatctggccgaggagatcggcatcgactccaaattggcgaaaagagccggattg
ctccacgacttgggcaaatctatcgaccacgaagtcgaaggcccccacgtggaactgggc
gtcgaactcgccagaaaatacaaggaaccggaagccgtcatcaacggcatcgaagcccat
cacggcgacgtagaattcgattccttggaatcgattctcgtgcaagcggccgatgccatc
agtgctgccagaccgggcgcccgcagagaaaccatcgaaacctatatcaagcgactcgaa
caattggaagagatcgctacgggtttcgaaggcatcgaaaaatcctttgcggtacaagcg
ggccgagaacttcgcattatcgtcaagcccgaagaaatcgacgaagcccatatgacttta
acggcgcgaaagatcgccaaggaaatcgaatcccaattggattttcccggacagatcaaa
gtcaacgtcatccgcgagacgcgcgccacggaatacgcgaaataa
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