KEGG   Aedoeadaptatus ivorii: NCTC13079_00914
Entry
NCTC13079_00914   CDS       T06636                                 
Symbol
rnjA
Name
(GenBank) Ribonuclease J 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
piv  Aedoeadaptatus ivorii
Pathway
piv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:piv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC13079_00914 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:piv03019]
    NCTC13079_00914 (rnjA)
Messenger RNA biogenesis [BR:piv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NCTC13079_00914 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: VEJ35748
UniProt: A0A3S4Z3W1
LinkDB
Position
1:complement(890398..892068)
AA seq 556 aa
MKNNGKLRIIPLGGMREVGKNMTVIEHQDELILVDCGMTFPEEDMPGIDVVIPDIKYLLQ
NKHKIKAIVITHGHEDHIGAIPYVLKQVNIPIYGTKLTLSLLENKLKEHRLLRSTKMVTV
GYRKPVKIGKFFEVEWVNVNHSIPDAAALAITTPVGVLVHTGDFKVDFTPISGDPIDLNR
LAEIGNRGVLALFSESTNVLREGFSMSERKVGATFDRLFALMKGNRIIIATFASNVYRIQ
QIITAAERYNRKIVLSGRSMLNVMGIAEKLGYLRVKPNTIIDIKDMNRYNPKQLVLITTG
SQGEPMSAMTRISTGEHKRIQLTKDDVIILSAHPIPGNESAINTVINHLLDKGVRVIYES
LSEIHVSGHAYQEEHKLLLNLLKPRFFIPIHGEVKHLLKHAEVAQKMGVPKKNIFMLENG
NCLEMTANDARMVKDVPAGQVMIDGLGIGDVGNIVLRDRKHLSEDGLIIAIIAMNRKTGD
MVSGPDIISRGFVYVRESTDLMNEVRGVVQKSVIDCKRQNVKDWSSIKSQIRDDLRSFIF
KKTRRNPMILPIIMDV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaagaataacggtaagcttcgcatcattcccttgggcggaatgcgcgaagtgggaaag
aacatgaccgtcatcgagcatcaggacgagctgattctcgtagactgcggtatgactttc
ccggaagaggatatgcccggcatcgatgtggtgattccggacatcaagtatttgctgcag
aacaaacataaaatcaaggcgatcgtcatcacccacgggcacgaagaccatatcggcgcc
attccctatgtcctcaagcaagtcaatattcccatatacggcaccaaattgactttgagt
ctactggaaaataagctgaaggaacacagactcctcaggagcacgaagatggtcaccgtc
ggatacagaaagcccgtaaagatcgggaaattcttcgaagtggaatgggtcaatgtcaac
cactctattcccgatgcggccgccctcgcgattaccacccccgtcggcgtactcgttcac
accggggacttcaaggtcgactttacgccgatttcgggcgatcccatcgacctgaaccgc
ttggcggagatcggaaaccgcggcgtgttggcgctctttagcgaatctacgaacgtactg
cgcgaaggattttccatgagcgagcggaaggtcggcgcgacatttgaccggctctttgcg
ctgatgaagggcaatcggattatcatcgcgacctttgcgtcgaatgtctatcggattcag
cagatcatcacggcggcggaacgctataacagaaagatcgtactcagcggccggagtatg
ttgaatgtcatgggcatcgccgaaaagttggggtatttgcgcgtcaagcccaatacgatt
atcgacatcaaggatatgaatcgctataatccgaaacaactggtcttgatcaccacgggc
agccaaggcgagcccatgagtgcgatgacgcggatttctaccggcgagcacaagcgcatt
cagctgaccaaggacgatgtcatcatcctttcggcgcatccgattccggggaacgaaagc
gcgatcaacaccgtaatcaaccaccttttggacaagggcgttcgcgtaatctacgaatcc
ctctccgaaattcacgtctcgggacacgcctatcaggaagagcataaactgttgttgaac
ctgttaaagccccgtttctttatcccgatccacggggaggtcaagcacctcttaaagcat
gcggaagtggcgcaaaaaatgggcgttcccaagaagaacatctttatgttggaaaacggg
aactgcctggagatgacggcaaacgacgcgcgcatggtgaaggatgtccctgccggacaa
gtgatgatcgacggcttgggcatcggcgatgtgggcaatatcgtactcagagacagaaaa
cacctctccgaagacggcctgatcatcgccattatcgcgatgaaccgcaagaccggagat
atggtctccggacccgatatcatctcccgcggtttcgtctatgtgcgggaatccacggat
ttgatgaacgaagtgcgcggcgtggtacaaaaatcggtcatagactgcaagcgtcagaac
gtcaaggactggtcttcgattaagtcgcagattcgcgacgacctgcgcagctttatcttc
aaaaagacccgcagaaaccccatgattcttcccattattatggatgtgtaa

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