Aedoeadaptatus ivorii: NCTC13079_00957
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Entry
NCTC13079_00957 CDS
T06636
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
piv
Aedoeadaptatus ivorii
Pathway
piv03420
Nucleotide excision repair
piv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
piv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13079_00957 (pcrA_2)
03430 Mismatch repair
NCTC13079_00957 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
piv03400
]
NCTC13079_00957 (pcrA_2)
Enzymes [BR:
piv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC13079_00957 (pcrA_2)
DNA repair and recombination proteins [BR:
piv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13079_00957 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC13079_00957 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
DUF2158
Motif
Other DBs
NCBI-ProteinID:
VEJ35791
UniProt:
A0A448V1V5
LinkDB
All DBs
Position
1:complement(937277..939448)
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AA seq
723 aa
AA seq
DB search
MLADYNERQREAILHTEGPLLVLAGAGSGKTRVVTGKIAYLIRERGVSPYAILAITFTNK
AAKEMKERVAALLDRNVDGMWISTFHSMCVRILRGDIHHLGYAKNFAIYDTSDQKTLVKD
CMARLNISRELYKPYSILSQISAWKTEGIDADAAMKEHFGDYHMRNMAEVYRLYERQKRE
NNALDFDDLLVKTVELFEQRPDVLAFYRHKFTHIFVDEYQDTNHIQYLLVRMLANDGTNL
TVVGDNDQSIYRWRGADVGNILSFERDFPGAKTVLLEQNYRSTSPILNSANRLIANNPCL
KEKNLWTDKEGGAPVVYREFYHNSEEETAVVQKMQHLNYKGASFGDMAILYRTNAQSRGF
EEILMREGIPYRVVGGLRFYDRKEIKDMIAYLQVIDNPRDEVNLVRIVNVPKRGIGETTI
GQLREYADAHDMDLFSVMEGLEENDELKIRAQKNIRSFVNLIHLLQGKRAEMGIRELVET
ILFESKYLEELKKEDTVEAASRLENLEEFVSAASEFERENPELTLTDFLANLSLVSDKNE
LADEDRAVKLMTVHGAKGLEFPIVFVVGLEERLFPTSRAFDDEADMEEERRLMYVAITRA
EERLFLSSAKSRTLYGNRIVSKRSRFVDEIEDAIEIVKDENRKKDQRTGHKIFAGTTTEE
IPKPKEAPQDAVHYQIGDKILHKKWGEGMVVQLKGGGAEAVISFAGKGLKTLNLSVAPIR
KKE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgttagcggactataacgagcgtcaaagagaagcgattttacataccgagggaccgctt
ttggtcctcgccggagccggaagcggaaaaacccgcgtcgtcaccggaaagatcgcgtac
ttgattcgggagcggggcgtatccccctatgcgattctcgccatcacctttaccaacaaa
gcggccaaggagatgaaggagcgggtcgccgctttactggaccgaaatgtcgacgggatg
tggatcagcaccttccactccatgtgcgtgcgcatattgcggggcgacattcaccatttg
ggatacgcgaagaactttgccatctacgacacatcggatcaaaagacgctggtaaaagac
tgtatggcgcggttgaacatcagccgagaactgtataagccttacagcatcctcagccag
atttctgcctggaagaccgaagggatcgatgcggatgcggcgatgaaagagcatttcgga
gattaccatatgcgcaatatggcggaggtctatcgtctgtatgaacgacaaaaacgcgag
aacaatgcactggacttcgacgacttattggtaaagaccgtcgagctgttcgagcagcgg
ccggatgtattggccttttatcgccataaatttacgcatatttttgtcgacgaataccag
gataccaaccacattcagtatcttttggtgcgcatgttggccaacgacgggacaaatctc
accgtcgtcggcgacaatgaccagtcgatttatcgctggcgcggcgccgatgtgggcaat
attctttcctttgaaagggactttcccggcgcaaagacggtcctcttggagcagaattat
cgctctacctcgccgattctgaacagcgccaatcgattgatcgcaaacaatccctgtctc
aaagaaaaaaacctatggaccgacaaagaaggcggcgcgcccgtcgtctaccgcgagttc
taccacaatagcgaagaagagaccgccgtcgttcagaaaatgcagcatctcaactacaag
ggcgcatccttcggcgatatggcgattctgtaccgcaccaatgcccagtcccgcggcttt
gaagagattttgatgcgcgagggcattccctatcgggtggtggggggcctgcgcttttac
gaccgcaaggaaattaaagacatgatcgcctatctgcaggtgatcgacaatccccgcgac
gaagtaaatctggtgcgcatcgtaaatgtgcccaagcgggggatcggcgagaccaccatc
ggccagctgcgcgaatacgcagatgcgcacgatatggacctgttttcggtgatggaaggg
ctcgaggaaaacgacgaattgaagattcgcgcccaaaaaaacatccgcagcttcgtcaat
ctgattcacctgctccaaggcaagcgggcggagatgggcatccgcgaattggtggagacc
attctgttcgaaagcaagtatctcgaggagctcaagaaagaggacaccgtagaggcggcg
agccgactggaaaacctcgaggagttcgtatcggcggcatcggaattcgagcgcgaaaat
ccggaattgacgctgacggattttctggcgaatctcagtttggtgagcgacaaaaacgaa
ttggccgacgaagaccgcgccgtaaaactgatgaccgtacacggggcaaagggtctcgaa
tttcccattgtgttcgtggtcggcctggaggagcgcttgttcccgacttcccgcgccttc
gacgacgaggcggatatggaggaggagcggcggctcatgtatgtcgccattacgcgggca
gaggagcggctctttctttcctcggcgaagtcccgcaccctctacggaaaccggattgtg
tcgaagcggagtcggtttgtagacgaaatcgaggacgccatcgagatcgtaaaagacgag
aaccggaagaaagatcagcgcacggggcataagatatttgccggtacgacgacggaagag
atacctaagccgaaagaggcgcctcaggatgcggtacactaccaaatcggcgataagatt
cttcacaaaaagtggggcgaaggcatggtggtgcaactgaagggcggcggtgccgaggcc
gtgatctcctttgcgggaaaggggcttaagactctaaacctctcggtggcgcccattcga
aagaaggaataa
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