Pseudomonas inefficax: RIN61_00415
Help
Entry
RIN61_00415 CDS
T09811
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00280
Valine, leucine and isoleucine degradation
pix00650
Butanoate metabolism
pix00907
Pinene, camphor and geraniol degradation
pix01100
Metabolic pathways
pix01120
Microbial metabolism in diverse environments
pix04146
Peroxisome
Module
pix_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RIN61_00415
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RIN61_00415
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RIN61_00415
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RIN61_00415
Enzymes [BR:
pix01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RIN61_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
WNN39802
LinkDB
All DBs
Position
87798..88697
Genome browser
AA seq
299 aa
AA seq
DB search
MPLPKHVRLVEVGPRDGLQNEAQPISVADKVRLVDDLTEAGLAYIEVGSFVSPKWVPQMA
GSAEVFAGIHQRPGVTYAALAPNLRGFEDALAAGVKEVAVFAAASEAFSQRNINCSISDS
LKRFEPIMEAARNHGVRVRGYVSCVLGCPYEGKVSAEQVAPVARALHDMGCYEVSLGDTI
GTGTAGETRRLFEVVAAQVPREQLAGHFHDTYGQALANVYASLLEGISVFDSSVAGLGGC
PYAKGATGNIASEDVVYLLQGLGIETGIDLDRLIAAGRRISSVLGRDNGSRVARARSAQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgcccaaacacgtccgcctggtcgaagttggcccccgcgacggcctgcagaac
gaagcccaacccatcagcgttgccgacaaggtgcgcctggtggacgacctcaccgaagcg
ggcctggcctatatcgaagtgggcagcttcgtctcgcccaagtgggtgccgcagatggcc
ggctccgccgaagtgttcgccggcatccaccagcgcccaggtgtcacctatgcggcgctg
gcccccaacctgcgcggcttcgaggacgccctggccgcaggcgtgaaggaagtggcggtg
ttcgcggccgcctccgaagccttctcgcaacgcaacatcaactgctcgatcagcgacagc
ctcaagcgcttcgagccgatcatggaagccgcgcgcaaccacggtgtgcgcgtgcgcggc
tatgtgtcgtgcgtgctcggctgcccctatgagggcaaggtcagcgccgagcaggtcgcc
ccggtggcccgcgccctgcacgacatgggctgctacgaagtatcgctgggcgacaccatc
ggcaccggtaccgccggcgaaacccggcgcctgttcgaggtggtcgcggcacaggtaccg
cgcgagcaactggccgggcacttccacgatacctatggccaggccctggccaacgtgtat
gccagcctgctcgaaggcatcagcgtgttcgacagctccgtggccgggctgggcggctgc
ccctatgccaaaggcgctaccggcaatatcgccagtgaagatgtggtgtacctgctgcag
gggctaggcattgaaaccggtatcgacctggaccgactgatcgccgccggccgccgcatc
agcagcgtgctgggccgcgacaacgggtcgcgggtagcgcgggcgcgcagcgcgcaatag
DBGET
integrated database retrieval system