Pseudomonas inefficax: RIN61_01230
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Entry
RIN61_01230 CDS
T09811
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00550
Peptidoglycan biosynthesis
pix01100
Metabolic pathways
pix01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RIN61_01230 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIN61_01230 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pix01011
]
RIN61_01230 (mrdA)
Enzymes [BR:
pix01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RIN61_01230 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pix01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RIN61_01230 (mrdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
KfrB
Motif
Other DBs
NCBI-ProteinID:
WNN39960
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All DBs
Position
278434..280329
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AA seq
631 aa
AA seq
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MPQPIPLKDHEKEKHLVNRRLLACAALVFSLCAVLVGRLYVLQVLQHDQQTAVSENNRVH
VLPIAPERGLIYDRNGVVLADNKPSFDLTMTRERAGGNTAKVLDTLAQVLSLGEDDRKQF
DKDLRRGRKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAEHFAHSVGY
VGRINEKEARTLDSTEYRGTQSIGKTGIEHFYESQLHGHVGYEEVETNAQGRVMRVLDHK
APTPGQDIVLTLDAHLQLAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGIS
FKQYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPN
YDHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMF
EEASGLMPSAEWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPH
LAMTVGGDAPVDPNPMPDIVLHDRHAWDQVNQGMQMVMHDPRGIARAAAAGAQYRIAGKS
GTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPADHPSVVVAVMIENGEAGGRVAGPVV
REVMDAYLLDEQGHLKPQYAGGVVPRSVPHT
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacccatcccactcaaggaccacgaaaaggaaaagcacctggtcaaccgccgg
cttctggcctgcgccgccctggtcttcagcctgtgtgccgtgctggtgggccggctctat
gtgctgcaggtgctgcagcacgaccagcagaccgccgtatcggaaaacaaccgcgtgcac
gtgctgcccatcgcccccgagcgtgggctgatctacgaccgcaacggcgtggtactggcc
gataacaagcccagcttcgacctgaccatgacccgcgagcgggccggcggcaacacggcc
aaggtgctcgataccctggcgcaggtgctgagccttggcgaggacgaccgcaagcagttc
gacaaggacctgcgccgtggccgcaagccgttcgagccggtgaccctgatggttggcctg
agcgaagagcagatagccctggtggcggtgaaccagttccgcctgccaggcctggaggtg
gaaccacagttcatccgcgagtacccgcttgccgagcatttcgcccactcggtgggctat
gtggggcgcatcaacgagaaagaggccaggacactcgacagcaccgaataccggggcacc
cagtcgatcggcaagactggcatcgagcacttctacgaaagccagctgcatggccacgtg
ggctacgaggaggtcgagaccaacgcccagggccgggtgatgcgtgtgctcgaccacaag
gccccgacgccgggccaggacatcgtcctgaccctggacgcccacctgcaactggccgcg
gaaaaggccctgggtgaccgccgcggttcggtggtggtgctcgacccggccaatggcgac
gtgctggcgatggtcagcaaccccagcttcgaccccaacctgttcgtcaagggcatcagc
ttcaaacagtacgccgccctgcgcgattccatcgaccgcccactgttcaaccgggtgctg
cgcggcctgtatgcccccggttcgacggtgaagccggaggtggccatcgccggtctcgac
agtggcgtgatcaccccgggcagccgggtgttcgaccccggctactacgagctgcccaac
tacgaccacaagtaccgcaactggaaccgcagcggcgatggctgggtggatatgtacacc
gccatcatgcgttccaacgacacttacttctacgaccttgcgcacaagctgggcatcgac
cgcctgcacgactacatggcggagttcggcctgggccagaaggtgtcgctggacatgttc
gaggaggcgtccgggctgatgccctcggccgagtggaagcgtgccacccggcgccaggcc
tggttcccgggcgagacgctgatcctgggcatcggccagggctacatgcaggtaaccccg
ctgcagctggcccaggccaccagcctgctggcgagcaagggcgtgtggcaccgcccgcac
ctggccatgaccgtgggcggcgatgcgccggtggaccccaacccgatgcccgatatcgtg
ctgcacgacaggcacgcctgggaccaggtcaaccagggcatgcagatggtcatgcacgac
ccgcgcggcatcgcccgtgcggccgcggccggtgcgcagtaccggattgccggcaagagc
ggcaccgcgcaggtggtggcgatcaagcagggcgaacgctacaaccgcaacaagacgttg
gagcggcaccgcgacaatgccctgttcgtcggctttgccccggctgaccacccgagtgtg
gtggtggcggtgatgatcgagaacggtgaagccggtgggcgggtggcagggccggtggtg
cgggaggtgatggatgcctatctgctggatgaacaggggcatctgaagccgcaatatgcg
ggtggggtagtgcctcggagcgtgccgcacacttag
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