Pseudomonas inefficax: RIN61_01560
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Entry
RIN61_01560 CDS
T09811
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pix
Pseudomonas inefficax
Pathway
pix02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIN61_01560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_01560
Transporters [BR:
pix02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RIN61_01560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WNN40022
LinkDB
All DBs
Position
339853..340878
Genome browser
AA seq
341 aa
AA seq
DB search
MLLSKRVTAVLSASLLTLACQAAQAADSLNFVSWGGTTQDAQKEAWAAPFTKATDIKVVQ
DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFTQIKRDKIDPRFVSDH
GVGSFFFSFVLGYNEGKLGANKPVDWTALFDTKTYPGKRALYKWPSPGVLELALLADGVA
PDKLYPLDLDRAFKKLDTIKKDIVWWGGGAQSQQLLASGEASLGQFWNGRVYALQQDGAP
VGVSWKQNLVMADFLVIPKGAKNKDAAMKFLANASSAEGQAEFANKTAYAPVNVDSVAKL
DKDLAQNLPTAYAQDQVTLDFAYWAKNGQAIAARWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgagcaaacgtgtaaccgcagtgctgtccgccagcctgctgaccctggcatgt
caggccgcccaggccgccgacagcctgaacttcgtcagctggggcggtaccacccaggac
gcccagaaagaagcgtgggccgcacccttcaccaaagctaccgatatcaaggtcgtccag
gacggccctaccgactacggcaagctcaaggccatggtcgagagcggcaacgtgcagtgg
gatgtggtcgacgtcgaagccgactttgctctgcgtgccgccagcgaagggctgctcgaa
cccctcgatttcacccagatcaagcgcgacaagatcgacccgcgcttcgtctccgatcat
ggcgtcggctcgttcttcttctccttcgtgctcggctacaacgaaggcaaactcggcgcc
aacaagccggtggactggactgcactgttcgataccaagacctaccccggcaagcgtgcc
ctgtacaaatggcccagcccgggcgtactggaactggccctgctggccgacggcgtagca
cccgacaagctctacccgctggacctggaccgcgccttcaagaagctcgacaccatcaag
aaagacatcgtctggtggggcggcggagcccagtcgcagcaactgctggcctcgggtgaa
gcctcgctcggccagttctggaacggccgcgtctatgccttgcagcaagacggtgcaccg
gtgggcgtgagctggaagcagaacctggtcatggccgacttcctggtcatccccaaaggt
gccaagaacaaggacgctgccatgaagttcctggccaacgccagcagcgccgaaggccag
gccgagttcgccaacaagaccgcctacgcgccggtgaacgtcgacagcgtggccaagctg
gacaaagacctggcgcagaacctgccgaccgcctacgcccaggaccaggtcaccctcgac
ttcgcctactgggccaagaacggccaggccatcgcagcccgctggaatgagtggttggtc
aaatga
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