Pseudomonas inefficax: RIN61_01770
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Entry
RIN61_01770 CDS
T09811
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pix03032
]
RIN61_01770
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_01770
Enzymes [BR:
pix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RIN61_01770
DNA replication proteins [BR:
pix03032
]
Prokaryotic type
DNA Topoisomerases
RIN61_01770
DNA repair and recombination proteins [BR:
pix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RIN61_01770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
WNN40064
LinkDB
All DBs
Position
379725..380747
Genome browser
AA seq
340 aa
AA seq
DB search
MLECPLPPTLHYVDDSQPGLTRRRWRGRFIYLDANGQRVRDSDTLARIAALVIPPAYTEV
WICADPQGHLQATGRDARGRKQYRYHAQWREVRDQHKYGRMLAFAQALPKLRAQLHAHLA
RPGLDREKVMALVISLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVEVKGSSIRFQFRGK
RGVEHNVSLNDRRLANLLKRCMELPGQALFQYLDDNGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALDLLRPLAWEPESEAKRQVAAIVRQVASRLGNTPAVCRRCYIHPAVL
EHYALGRLANLPKNRVRKGLDREEVALLLFLQALEEQDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatgccccctgccgcccaccctgcactatgtcgacgacagccagccgggcctg
acccggcgccgctggaggggccgtttcatctacctggacgccaacggccaacgggtgcgc
gacagcgataccctcgcccgcatcgcagcactggttatccccccggcctataccgaggtg
tggatctgcgccgacccgcaaggccacctgcaagcgacaggtcgcgatgcccgcggccgc
aagcaataccgctaccatgcgcagtggcgagaagtacgcgaccagcacaagtacgggcgc
atgctggcgtttgcccaggccctgccgaaactgcgcgcgcaactgcacgcccaccttgcc
cggcccggcctggaccgggaaaaggtgatggcgctggtgatcagcctgctggatcacacc
ctgatccgcatcggcaaccagcgctacctgcgtgacaaccagtcctatggcctgaccacc
ctgcgcaatcgccatgtggaggtgaagggcagcagcatccgcttccagttccgcggcaag
cgcggcgtcgagcacaacgtcagcctcaacgacaggcgcctggccaacctgctcaagcgc
tgcatggagctgcccgggcaagcgctgttccagtacctggacgacaacggccagcgccac
agcgtcggctccagcgaggtcaaccagtttctgcagcagctgaccggcgccgactttacc
gccaaggactaccgcacctgggccggcagcagtctggccctggacctgctcaggcccttg
gcctgggagcccgagagcgaagccaaacgccaggtcgccgcgatcgtacgccaggtagca
tcacgcctgggcaatacaccggcggtgtgcaggcgttgctacatccacccggctgtactt
gaacactatgccctggggcggttggccaacttgccgaagaaccgtgtacgcaaaggcctg
gaccgtgaagaagtagccttgctgctatttcttcaggcactcgaggaacaggatgaccat
taa
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