Pseudomonas inefficax: RIN61_02220
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Entry
RIN61_02220 CDS
T09811
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pix03016
]
RIN61_02220
Enzymes [BR:
pix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
RIN61_02220
Transfer RNA biogenesis [BR:
pix03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RIN61_02220
Prokaryotic type
RIN61_02220
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
NAD_binding_10
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
WNN40148
LinkDB
All DBs
Position
468491..469450
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AA seq
319 aa
AA seq
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MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI
THVHGDHCFGLPGLLASAGMSGRTQPLDLVLPAALHDWVRQGLVASDTFLPFELRLLPVE
ELVEWRSDAVQVTSVQLSHRVPSVGFVFTELNPEPRLDIPRLEADGIPRGPLWGDLAKGL
TVQHGGRRLHGSDYLRPSRPPRRVIVCGDNDNPELLADAAKGADVLVHEATFTQAVVERT
GVTFGHSTAAAVARFAEAAGVRNLVLTHFSARYQNDPRRNPSIDNVRDEALAHYSGQLTL
AQDLQRYHIGRDGCLEPAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgttcctcggcacctccgccggcgtgccgaccaaggcacgcaacgtcagc
gctaccgccgtgatcgaagccagcggcagccactggtacctggtcgactgtggcgaaggc
acccagcaccggctgctgcacacgccgctgtcgatccgcgacctgcgcgccatcttcatc
acccacgtgcacggcgaccattgcttcggcctgccgggcctgctggccagcgccggcatg
agcgggcgcacccagccgctggaccttgtcctgcccgctgccctgcacgactgggtgcgg
caggggctggtggctagcgataccttcttgccattcgaactgcgcctgctgcccgtggaa
gagctggtcgagtggcgcagtgatgccgtgcaagtaaccagcgtgcaactgtcgcaccgg
gtaccgagcgtcggcttcgttttcaccgagctcaaccccgaaccacgcctggacattccg
cgcctggaagccgatggcatcccccgcggcccgctgtggggcgacctggccaagggcctg
acggtgcagcatggcgggcggcggctgcatggcagcgactacttgcgcccttcgcgcccg
ccgcggcgggtgatcgtgtgcggcgacaacgacaaccccgagctattggccgacgcagcc
aagggcgcggacgtgctggtacacgaagccacattcacccaggcggtggtcgagcgcacg
ggggttaccttcggccacagcaccgcggctgcggtggcgcgctttgccgaagctgcgggc
gtgcgcaacctggtgctgacgcacttcagcgcccgctaccagaacgacccacggcgcaac
ccgagcatcgacaacgtgcgcgacgaagccctcgcccactacagcgggcagctgaccctg
gcgcaggacctgcagcgctatcacatcgggcgcgatggctgtctcgagccggcgggatga
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