Pseudomonas inefficax: RIN61_02250
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Entry
RIN61_02250 CDS
T09811
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_02250
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RIN61_02250
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
GAF_2
HTH_IclR
Orbi_VP3
Motif
Other DBs
NCBI-ProteinID:
WNN42230
LinkDB
All DBs
Position
complement(477526..478146)
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AA seq
206 aa
AA seq
DB search
MANHKIEIRRRNIEKILQAAEKVFAEKGYGATSMGDIAEQAELPRSNLHYYFSTKDDLFR
AVLQDLLDVWKQDALCFENFDDPRVVLTSYIRAKMGHSRSRPLGSKIWAEEMLHGAPVLG
VNLDESLVPWAKLKEAKIRRWVEEGRILPVEPSALLYMIWASTQHYADFGYQVALLNGGE
ALSDMAFESSVQTVTSVILRGIGLEP
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccacaagatcgaaattcgccggcgcaatatcgagaagatcctgcaggcggca
gaaaaggtgttcgccgagaagggctatggtgccacctcaatgggcgatatcgccgagcag
gccgagttgccgcgttccaacctgcattattacttcagtaccaaggacgacctgttccgt
gcggtgctgcaggacctgctggatgtgtggaagcaggacgcgctgtgcttcgagaatttc
gacgacccgcgcgtggttttgactagttacatccgggcgaagatgggccactcgcgctcg
cggccgctgggttcgaagatctgggccgaagagatgctgcacggggcgccggtactgggg
gtgaacctggatgaaagcctggtgccctgggccaagctgaaggaagccaagatccgccgc
tgggtggaggaggggcgcatcctgccggtggagccgtcggcgcttttgtacatgatctgg
gcctcgacccagcactatgccgactttggttaccaggtggccttgctcaatggcggcgag
gcgttgtcggacatggcctttgaaagttcggtgcagacggtgaccagcgtgatcttgcgg
gggatcgggctggagccttga
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integrated database retrieval system
