KEGG   Pseudomonas inefficax: RIN61_03030
Entry
RIN61_03030       CDS       T09811                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pix  Pseudomonas inefficax
Pathway
pix00010  Glycolysis / Gluconeogenesis
pix00020  Citrate cycle (TCA cycle)
pix00260  Glycine, serine and threonine metabolism
pix00280  Valine, leucine and isoleucine degradation
pix00310  Lysine degradation
pix00380  Tryptophan metabolism
pix00620  Pyruvate metabolism
pix00630  Glyoxylate and dicarboxylate metabolism
pix00640  Propanoate metabolism
pix00670  One carbon pool by folate
pix00785  Lipoic acid metabolism
pix01100  Metabolic pathways
pix01110  Biosynthesis of secondary metabolites
pix01120  Microbial metabolism in diverse environments
pix01200  Carbon metabolism
pix01210  2-Oxocarboxylic acid metabolism
pix01240  Biosynthesis of cofactors
Module
pix_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pix_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pix_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pix_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pix_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pix00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RIN61_03030 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RIN61_03030 (lpdA)
   00620 Pyruvate metabolism
    RIN61_03030 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RIN61_03030 (lpdA)
   00640 Propanoate metabolism
    RIN61_03030 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RIN61_03030 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RIN61_03030 (lpdA)
   00310 Lysine degradation
    RIN61_03030 (lpdA)
   00380 Tryptophan metabolism
    RIN61_03030 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RIN61_03030 (lpdA)
   00670 One carbon pool by folate
    RIN61_03030 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pix04147]
    RIN61_03030 (lpdA)
Enzymes [BR:pix01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RIN61_03030 (lpdA)
Exosome [BR:pix04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RIN61_03030 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA NAD_binding_8 FAD_binding_3 3HCDH_N Thi4 DAO AlaDh_PNT_C Lys_Orn_oxgnase 2-Hacid_dh_C Amino_oxidase Lycopene_cycl UDPG_MGDP_dh_N DUF3373
Other DBs
NCBI-ProteinID: WNN40299
LinkDB
Position
complement(666302..667738)
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKAL
LDSSWKYKEAKESFNVHGISTGEVKMDVAAMVGRKAGIVKNLTGGVATLFKANGVTSIQG
HGKLLAGKKVEVTKADGTTEVIEAENVILASGSRPIDIPPAPVDQNVIVDSTGALEFQAV
PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDTFLMAADTAVSKEAQKTLTKQGLDIK
LGARVTGSKVNGNEVEVTYTNAEGEQKITFDKLIVAVGRRPVTTDLLAADSGVTIDERGY
IFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHVANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgacccagaaattcgacgtagtggtgattggtgcaggtcctggcggctatgtggctgcc
atcaaggccgcacaacttggtctgaagactgcctgtatcgagaaatacaccgacgccgag
ggcaagctggccctgggcggcacctgcctgaacgtaggttgcattccttccaaggcgctg
ctggacagctcctggaaatacaaggaagccaaagagagcttcaacgtccacggtatctcc
actggcgaagtgaagatggacgtcgctgcgatggttggccgcaaggccggcatcgtcaag
aacctgaccggtggcgttgccaccctgttcaaggccaacggcgttacttcgatccagggc
cacggcaagctgctggccggcaagaaagtcgaagtcaccaaggctgacggcactaccgaa
gtcatcgaagccgagaacgtgatcctggcttccggctcgcgcccgatcgacattccaccg
gctccggtcgaccagaacgtcatcgtcgattccaccggcgccctggaattccaggccgtg
ccgaagcgtctgggtgttatcggtgctggcgttatcggcctggaactgggctcggtatgg
gctcgcctgggtgctgaagtcaccgtgcttgaagccctggacaccttcctgatggctgcc
gacaccgccgtgtcgaaagaagcccagaagaccctgaccaagcaaggtctggatatcaag
ctgggcgcgcgcgtcaccggctcgaaagtcaacggcaacgaagtcgaagtgacctacacc
aacgccgagggcgagcagaagatcaccttcgacaagctgatcgtcgcggtcggccgtcgc
cctgtgaccaccgatctgctggctgccgacagcggcgtgaccatcgacgagcgtggctac
atcttcgtcgacgactactgcgctaccagcgttcctggcgtttatgccatcggtgacgtg
gtccgcggcatgatgctggcccacaaggcctcggaagagggcatcatggtggtcgagcgc
atcaagggccacaaggcccagatgaactacgacctgatcccgtcggtcatctacacccac
ccggaaatcgcgtgggtcggcaagaccgaacaggccttgaaggccgaaggcgttgaggtt
aacgtgggcaccttcccgttcgcggccagcggccgtgcgatggctgccaacgacaccggt
ggtttcgtcaaggtcatcgccgatgccaagaccgaccgcgtcctgggtgtacacgtgatt
ggcccatcggctgccgaactggtgcagcagggcgcaatcgcaatggaattcggcaccagt
gccgaggatctgggcatgatggtcttcagccatccgaccctgtccgaagcgttgcatgaa
gcagcgctggcggtgaatggcggcgccattcacgtggccaaccgtaagaagcgttaa

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