Pseudomonas inefficax: RIN61_03050
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Entry
RIN61_03050 CDS
T09811
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00020
Citrate cycle (TCA cycle)
pix00190
Oxidative phosphorylation
pix00650
Butanoate metabolism
pix00720
Other carbon fixation pathways
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01120
Microbial metabolism in diverse environments
pix01200
Carbon metabolism
Module
pix_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pix_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pix_M00149
Succinate dehydrogenase, prokaryotes
pix_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RIN61_03050 (sdhA)
00650 Butanoate metabolism
RIN61_03050 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RIN61_03050 (sdhA)
00720 Other carbon fixation pathways
RIN61_03050 (sdhA)
Enzymes [BR:
pix01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RIN61_03050 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
WNN40303
LinkDB
All DBs
Position
complement(672888..674660)
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AA seq
590 aa
AA seq
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MASIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GVATNIHGQAITMDAEGNDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTEGVEYRDASDTDVDVALNRLNKLNERTTGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDFEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctagcattccaaccatttccttcgacgccatcatcatcggtggcggcggcgccggc
atgcgcgctgcgctgcagctggctcaaggcggccacaagactgccgtggtcaccaaggtc
ttcccgacccgttcgcacactgtatccgcccagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgactggcgctggcacatgtacgataccgtcaagggctccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggctgcggtcttcgag
ctggaccacatgggcctgccgttctcgcgtaccgaaaccggtcgtatctaccagcgtccg
ttcggtggtcagtccaaggacttcggcaagggtggccaggctgcccgtacctgcgccgct
tccgaccgtaccggtcacgcgctgctgcacaccctgtaccagggcaacctgaaagccggc
accactttcctcaacgagtactacgcagttgacctggtgaagaaccaggacggcgcattc
gttggcgtgatcgcgatctgcatcgaaaccggcgagaccctgtacatcaagtccaaggcc
accgtgctggccactggcggtgccggccgtatctacgcctccaccaccaacgccctgatc
aacaccggtgacggcgtgggcatggccctgcgtgccggcgtgccagtgcaggacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggtcaccgaaggttgc
cgcggtgagggtggctacctgatcaacgcccacggcgagcgcttcatggagcgttatgcg
ccgaacgcgaaagacctggccggccgcgacgtggtcgcccgttccatggtcaaggaaatc
atcgccggcaacggcgtgggcccgaacaaggaccacgtactgctgaagctggaccacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgaactgtccaagaccttcgcc
cacgtcgaccctgtggtcgcgccggtgccggtcatcccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccatcaccatggacgccgaaggcaacgatcac
atcatcccgggcctgttcgccgtaggtgaagtggcgtgcgtatcggtacacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggccgtgccgccggcctgcac
ctggagaaggcgctgaccgaaggcgtggaataccgcgacgccagcgacaccgacgtcgat
gttgccctgaaccgcctgaacaagctgaacgagcgcaccaccggtgaagacgttgccagc
ctgaagcgcgagctgcagagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtatcgagcagctggccggtctgcgtgaccgtatcgccaacgtcaag
atcaacgacaagtcccaggccttcaacaccgcgcgtatcgaagcgctggagctgcagaac
ctgctggaagtcgccgaagctaccgccattgcggccgaagcccgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccctg
tactacccgggtgagaagcgcgtcgccaagcgtggcgtcaactttgcgccgaagactgtt
ccagccttcgaaccaaaagtccggacttactga
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