Pseudomonas inefficax: RIN61_03825
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Entry
RIN61_03825 CDS
T09811
Symbol
fleQ
Name
(GenBank) transcriptional regulator FleQ
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pix
Pseudomonas inefficax
Pathway
pix02020
Two-component system
pix02025
Biofilm formation - Pseudomonas aeruginosa
pix02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RIN61_03825 (fleQ)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
RIN61_03825 (fleQ)
09142 Cell motility
02040 Flagellar assembly
RIN61_03825 (fleQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_03825 (fleQ)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pix02035
]
RIN61_03825 (fleQ)
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
Other families
RIN61_03825 (fleQ)
Bacterial motility proteins [BR:
pix02035
]
Flagellar system
Flagellar assembly proteins
Others
RIN61_03825 (fleQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
AAA
bpMoxR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WNN40446
LinkDB
All DBs
Position
complement(851959..853434)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSARRRDLAVVLNFLGEENLACSSQDWQQVVEPLSSSREVLCVLIGTV
NAPGNVLGLVKTVAGWDEFLPVLLLGEISSAEFPEDLRRRVLSNLEMPPSYSQLLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLETMIEEGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSASIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPN
FNNHAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRQGGEEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctgctgatcgacgacgacagcgcacgccgccgcgacctg
gcggtggtgcttaacttcctcggcgaagaaaacctcgcttgctccagccaggactggcag
caagtggtcgagcctttgtcttcgagtcgcgaagtgctgtgcgtgctcatcggcactgta
aacgccccgggcaatgtgcttgggctcgttaagacagtggctgggtgggatgagttcctt
ccggttctgcttttaggtgaaatttcttctgcggagttcccggaagaccttcgccgccgg
gtactttccaacctggaaatgccgccaagctacagccagctgctggattcgctgcatcgt
gcccaggtctatcgcgagatgtacgaccaggcgcgcgagcgtggtcgccagcgcgaaccc
aacctgttccgcagcctggtcggcaccagccgtgccatccagcacgtgcgccagatgatg
cagcaggtggccgataccgatgccagcgtgttgatcctgggtgagtccggcaccggcaag
gaagtggtcgcgcgcaacctgcactaccattccaagcgccgcgaagcgccgttcgtgccg
gtcaactgcggtgcgatccccgccgagttgctggaaagcgaactgttcggccacgagaag
ggcgccttcaccggggcgatcaccagccgtgccgggcgtttcgagctggccaacggcggt
accctgttcctcgacgaaatcggcgacatgccgttgccgatgcaggtcaagctgttgcgc
gtgctgcaggagcgtaccttcgagcgcgtgggcagcaacaagacccagagcatcgatgtg
cgcatcattgccgcgacccacaagaacctcgagaccatgatcgaggagggcaccttccgc
gaagacctgtactatcgcctgaacgtgttccccatcgagatggcgccgctgcgtgagcgg
gtggaagacatcccgctgctgatgaacgagctgatctcgcgcatggagcacgagaagcgc
ggttccatccgtttcaactctgcgtcgatcatgtcgctgtgtcgccacggctggccgggc
aacgtgcgcgagctggccaacctggtggagcgcatggcgatcatgcacccgtacggggtg
attggcgtgtccgagctgccgaagaaattccgttacgtcgatgacgaagacgagcagatg
gtcgacagcctgcgcagtgacctggaggagcgcgtggcgatcaacggccatacgccgaac
ttcaacaaccacgccatgctgccgcctgaaggcctggacctgaaggactacctgggtagc
ctggagcagggcctgatccagcaggcgctggacgatgccaacggtatcgttgcacgcgcg
gctgaacgtttgcgtattcgtcgtaccaccctggtcgagaagatgcgcaagtacggcatg
agccgccaggggggcgaggagcaggcagaggattga
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