Pseudomonas inefficax: RIN61_04475
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Entry
RIN61_04475 CDS
T09811
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00061
Fatty acid biosynthesis
pix00071
Fatty acid degradation
pix01100
Metabolic pathways
pix01212
Fatty acid metabolism
pix02024
Quorum sensing
pix04146
Peroxisome
Module
pix_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RIN61_04475 (fadD1)
00071 Fatty acid degradation
RIN61_04475 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RIN61_04475 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIN61_04475 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pix01004
]
RIN61_04475 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pix04147
]
RIN61_04475 (fadD1)
Enzymes [BR:
pix01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RIN61_04475 (fadD1)
Lipid biosynthesis proteins [BR:
pix01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RIN61_04475 (fadD1)
Exosome [BR:
pix04147
]
Exosomal proteins
Exosomal proteins of breast milk
RIN61_04475 (fadD1)
Exosomal proteins of breast cancer cells
RIN61_04475 (fadD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
WNN40569
LinkDB
All DBs
Position
complement(994344..996041)
Genome browser
AA seq
565 aa
AA seq
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MIEHFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPQAVRFNDALALGKGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKVIDDAGNELPLGEVGELCIKGPQVMKGYWQ
REDATAEILDSNGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRQIEFRDALPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacatttttggaaggataagtacccagccgggattacggcggaaatcaatcct
gacgaattccccaatatccaggcggtactcaagcaatcctgccaacgctttgccgacaaa
ccggcctttagcaacctgggcaagactatcacttatggcgagctgtatgcgctgtcgggg
gcgtttgccgcctggctgcagcagcataccgacctcaagccaggtgaccgcattgccgtg
caactgcctaacgtattgcaatacccggtggcggtattcggtgccatgcgtgccgggctg
atcgtggtcaataccaacccgctgtacaccgcacgggaaatggaacatcagttcaacgac
tcgggcgccaaggcgctggtgtgcctggccaacatggcccacctggccgagaaggtggtg
cccaagactcaggtcaggcatgtcatcgtcaccgaagtggccgacctgctgccgccgctc
aagcgcctgctgatcaacagcgtgatcaagtacgtgaagaagatggtgccggcctacaac
ctgccgcaggccgtgcgcttcaacgacgcgctggcgttgggcaagggccagccggtgacc
gaggccaacccacaggccaatgacgtggcggtgctgcaatacaccggtggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggccaacatgctgcagtgccgg
gcgctgatgggctccaacctgcacgaaggctgcgaaatcctcatcacgccgctgccgctg
taccacatctatgcctttaccttccattgcatggcgatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgtgacctgccggccatggtcaaggagctgggcaagtggaag
ttcagtggcttcgtcggcctcaataccttgttcgttgccttgtgcaacaacgaggcgttc
cgggccctggacttctcggcgctgaagatcaccctgtccggcggcatggccctgcagctg
agcgtggccgagcgctggaaggccgtgaccggttgcgccatctgcgaaggctatggcatg
accgagaccagcccggtggccgcggtgaacccgtcggaggccaaccaggttggcactatc
ggtattccggtaccctcgaccctgtgcaaggtgatcgacgacgccggcaacgaactgccg
ctgggcgaagttggtgagctgtgcatcaagggccctcaggtgatgaagggctactggcag
cgcgaggatgccactgcggagatcctcgacagcaatggctggctgaagaccggtgacatc
gcggtgatccaggcggatggctacatgcgcattgtcgaccgcaagaaggacatgatcctg
gtctcgggcttcaacgtgtaccccaacgagctggaagatgtgctggcggccctgccaggc
gtgctgcagtgcgcggccatcggcgtaccggacgagaagtccggtgaagtgatcaaggtg
ttcatcgtggtcaagccgggcatgaccgtgaccaaggagcaggtgatggagcacatgcgt
gccaacgtcaccggctacaaggtcccgcgccagatcgagttccgcgacgcgttgccgacc
accaacgttggcaagatcctgcgccgtgagctgcgcgatgaagagctgaagaagcagggc
ttgaagaagatcgcctga
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