Pseudomonas inefficax: RIN61_05140
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Entry
RIN61_05140 CDS
T09811
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pix03009
]
RIN61_05140 (rimO)
Enzymes [BR:
pix01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RIN61_05140 (rimO)
Ribosome biogenesis [BR:
pix03009
]
Prokaryotic type
ribosomal protein modification factors
RIN61_05140 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
WNN40692
LinkDB
All DBs
Position
1152732..1154063
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDDVKQD
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccaaaagcc
ctggtcgattccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtgccc
acctacgaggacgccgacgtggtggtggtcaacacctgcggtttcatcgacagcgccaag
gccgagtcgctggaagtgatcggcgaagcgatcaaggaaaacggcaaagtcatcgtcacc
ggctgcatgggtgtcgaggaaggcagcatccgtgacgtgcacccgagcgtgctgtcggtc
accggcccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtggtgccgccacgc
caggaccacaacccgctgatcgacctggtgccgccgcagggcgtcaagctgaccccgcgc
cactatgcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtccatgcgcggcaagctggtcagccgcccggtcggcgaagtgctgagcgaggccgag
cgcctggtcaaggccggggtcaaggaaatcctggtgatttcccaggacaccagcgcctat
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgaactgtgcgaagcactgagcagcctgggtgcctgggtacgcctgcattacgtttac
ccatacccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggacatcccgttccagcacgccagcccgaaagtgctcaaggccatgaagcgcccggcg
ttcgaagaccgcaccctggcgcgtatcaagaactggcgcgagcagtgcccggagctggtg
attcgctccaccttcatcgtcggtttcccgggcgagaccgaagaagacttccaatacctg
ctggactggctgaccgaagcccagctggaccgcgtgggctgcttccagtactcgccggtg
gaaggcgccccggccaacgacctgggcctggaagaagtgccggacgacgtcaagcaggac
cgttgggaccgcttcatggcccaccagcaggccatcagcgccgcccgcctgcaactgcgc
atcggcaaggaaatcgacgtattgatcgatgaagtggaagagcaaggttcggttggccgc
agcttcttcgacgccccggagatcgatggcagcgtgttcatcgatggcgaccacggtttc
aagccgggtgacaaggtgcgttgccgcgtggtggatgccgacgaatacgacatgtgggct
gaacccatctaa
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