KEGG   Pseudomonas inefficax: RIN61_05345
Entry
RIN61_05345       CDS       T09811                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
pix  Pseudomonas inefficax
Pathway
pix03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pix00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RIN61_05345
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pix02044]
    RIN61_05345
Secretion system [BR:pix02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RIN61_05345
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: WNN40730
LinkDB
Position
complement(1200323..1201630)
AA seq 435 aa
MHPDDPQANDRTQFMPRPGGRAAPQPAAPAPQLPPLQVPAEPLAPGQGKGLNPLEQAAGP
LLALLTRLRNTIAHSAPASLRAQLLAYLRQFETRAEAAGVVRNEVLLARYALCTALDEAV
LSTPWGSASDWSRQSLLITVHNEAWGGEKVFQLMEHCLQSPRERLNLLELLYLCTSLGFE
GRYRVMNDGRSQLEALRERAAAAIRSARGERERELSPHWRGVAVSRDRLAQFVPPWVGLA
VAVALLLLLLFGLRLKLAADAEPVFRGIHALGEIPVQAMDRPVLQPKPVERPRLAGFLAD
DIKAGRVAVEDAVDRSVVTIRGDELFASASASIKGDFQPLMLRIAEAVAKVKGNVRVTGH
SDNQRIATLRFPSNWALSQARAEEVRSILAARTGQPERFSAQGLSDTEPLASNDTAQGRA
KNRRVEITVLAEGVE
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgcacccggacgatccgcaggccaacgaccgtacccagttcatgccgcgccctggtggc
cgtgctgcgccgcaacccgctgcgccagcaccgcagctgccgccgttgcaggtaccggcc
gagcccctggcacctggccagggcaagggactcaacccgctcgagcaggctgccggcccg
ttgctggccttgcttacccggctgcgcaacaccatcgcccactcggcaccggccagcctg
cgagcgcagttgctggcctatctgcgccagttcgagacccgtgccgaagccgccggggtg
gtgcgcaacgaggtgctgctggcgcgctatgcgctgtgcaccgcgctggacgaagcggtg
ctcagcacgccgtggggcagtgccagcgactggagccggcagagcttgctgatcacggtg
cacaacgaggcctggggcggtgagaaggtgttccagctgatggagcattgcctgcagagc
ccgcgcgaacggctcaacctgctggaactgttgtacctgtgcaccagcctcggcttcgaa
ggccgctaccgggtcatgaacgatggccgcagccagctcgaagcgctgcgcgagcgcgcc
gctgcggcgattcgcagcgcccgtggcgagcgtgagcgtgaactctcgccacactggcgt
ggggtggccgtcagccgtgaccgtctggcccagttcgtgccgccatgggtgggcctggcg
gtggccgtggcgttgctgttgctgttgttgttcggcctgcgcctgaagctggcggccgat
gccgagccggtgttccgaggtattcacgcgctgggcgaaatcccggtacaagccatggac
cgcccggtgttgcagcccaagccagtggagcgcccgcgcctggccgggttcctcgccgat
gacatcaaggctggccgggtcgccgtagaagacgcggtcgaccgctcggtggtgaccatt
cgcggcgacgagctgtttgccagtgccagcgccagcatcaagggcgatttccagccgttg
atgctgcgcatcgccgaggcagtggccaaggtcaagggcaatgtccgggtcaccgggcac
agcgacaaccagcgcatcgcgacgctgcgcttcccgtccaactgggcgttgtcgcaggca
cgcgccgaagaggtcaggagcatcctcgccgcgcgcaccgggcaacccgagcgcttcagc
gcccaagggttgagcgacaccgaaccactggcgtcgaacgacaccgcgcagggccgggcg
aagaatcgccgggttgaaatcaccgttctggcggagggcgtcgagtga

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