Pseudomonas inefficax: RIN61_05410
Help
Entry
RIN61_05410 CDS
T09811
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pix
Pseudomonas inefficax
Pathway
pix02025
Biofilm formation - Pseudomonas aeruginosa
pix03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RIN61_05410 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
RIN61_05410 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pix02044
]
RIN61_05410 (tssH)
Secretion system [BR:
pix02044
]
Type VI secretion system
Imp/Vas secretion system core components
RIN61_05410 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_16
AAA_22
Sigma54_activat
nSTAND3
Zeta_toxin
TniB
AAA_25
AAA_7
ATPase_2
NACHT
AAA_18
Torsin
Hpr_kinase_C
Lipase_chap
CbiA
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
WNN40743
LinkDB
All DBs
Position
1213318..1215993
Genome browser
AA seq
891 aa
AA seq
DB search
MGEISRAALFGKLNSIAYKAIEAATVFCKLRGNPYVELVHWLHQLLQLQDSDLHRIVRQC
DIEPARLARDLTDALDRLPRGSTSITDLSSQVEEAVERGWVYGSLMFGESQVRTGYLLVG
ILKTPSLRHALLGLSSEFAKLKVEALSERFSEYVGDSPENHLGATDGFSAAQPGEASGAV
APAAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGV
GKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASP
KPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGSLRTVAATTWAEYKKHIEKDPALT
RRFQVVQVDEPSEAKALLMMRGVASTMEQHHQVQILDEALEAAVKLSHRYIPARQLPDKS
VSLLDTACARVAISLHAVPAEVDDSRRRIEALEVEQAIIAREAAIGVPTAQRQAQAETLL
AEERQRLATLESRWAEEKALVDQLLATRAQLRDQAGVVDQDAQVPGNPELRETLADLQRR
LSALQGESPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDSLLAKRIIGQDHA
LKMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEALYGGEQNLITINMSE
FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDK
GVMEDGEGRQIDFRNTLILLTTNAGTELIARTCSDPQALPDPDTVASQLRQPLLEIFPPA
LLGRLVTIPYYPLSDAMLKAITRLQLERIRKRVEGTHKVGFAYDEGVVELIVSRCSETES
GGRMIDAILTNGLLPDMSREFLTRMLEGKPLASVRISRRDNDLHYDFGAAD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagccgcgccgcgctgttcggcaaactcaacagcatcgcctacaaggcc
atcgaggccgcaacggtgttctgcaagctgcggggcaacccctatgtcgaactggtgcac
tggctgcaccagttgctgcaactgcaggacagcgacttgcaccgtatcgtgcgccagtgc
gatatagagccggcgcgcctggcccgcgacctgaccgatgcgctggaccggctgccgcgc
ggttcgacgtcgatcaccgacctgtcctcgcaggtggaagaagccgtcgagcgcggctgg
gtttacggcagcctgatgttcggcgagagccaggtgcgcaccggttacctgctggttggc
attctcaagaccccgagcctgcgccacgccttgctggggctgtcgagcgagttcgccaag
ctgaaggtcgaggcgttgagcgaacgcttcagcgaatacgtgggcgactcgccggagaac
cacctgggcgccaccgacggtttcagtgctgcgcaacctggcgaagccagcggcgccgtg
gcgcccgcggcgatgggcaagcaggaggcgctcaagcgctttaccgtcgacctgaccgaa
caggcccgcagcggcaagctcgaccctatcgtcggccgtgacgaagagatccgccagctg
gtcgacatcctcatgcgccgccggcagaacaacccgatccttactggcgaggccggtgtc
ggcaagaccgccgtggtcgaaggcttcgccttgcgcatcgtcgccggcgacgtgccgccg
gcgctcaaggacgtcgagctgcgcagcctggacgtcggcctgctgcaggccggcgccagc
atgaaaggcgagttcgagcagcgcctgcgccaggtgatcgaggatgtgcaggcttcgccc
aagccgatcatcctgttcatcgatgaagcgcacaccctggtcggtgccggtggcgctgcc
ggcaccggcgatgccgccaacctgctcaagccggcgctcgcccgtggcagcctgcgcacg
gtggcggcaaccacctgggccgagtacaagaagcacatcgagaaggacccggcgctgacc
cgccgcttccaggtggtgcaggtggacgagccgagcgaagccaaggcgctgctgatgatg
cgtggagtggcatcgaccatggagcagcaccaccaggtgcagatcctcgacgaagcgctc
gaagccgcggtcaagctgtcgcaccgctacatcccggcgcgccagttgccggacaagtcg
gtgagcctgctcgataccgcctgcgcgcgcgtggccatcagcctgcacgcggtgccggcc
gaggtcgacgacagccgccggcgtatcgaggcgctggaggtcgagcaggcgatcattgcc
cgtgaagccgccatcggcgtgcctaccgcgcagcgccaggcccaggccgaaaccctgctg
gccgaagagcgccaacgcctggccacgctggaaagccgctgggccgaagaaaaggccctg
gtcgaccagttgctggccacccgtgcccagctgcgcgaccaggccggggtggtcgaccag
gacgcgcaggtgcctggcaaccctgaactgcgcgaaacgctggccgacctgcaacggcgc
ctgagcgccctgcaaggcgagagcccgctgatcctgccgaccgtggactaccaggcagtc
gcctcggtggtggccgactggaccgggatcccggtggggcgcatggcgcgcaacgagatc
gagaccgtgctcaacctcgacagcctgttggccaagcgcatcattggccaggaccatgcg
ctgaaaatgatcgccaagcgcatccagacctcccgcgccggcctcgacaacccgaacaag
ccgattggcgtgttcatgctcgccggcacctctggcgtgggcaagaccgagactgcactg
gccttggccgaggcgttgtacggcggtgaacagaacctgatcaccatcaacatgagcgag
ttccaagaggcccataccgtctcgaccctcaagggcgccccacctggctacgtcggctac
ggcgaaggcggcgtgctgaccgaggccgtgcgccgccggccgtacagcgtggtgctgctg
gacgaggtggagaaggcccacccggacgtgcacgagattttcttccaggtcttcgacaag
ggcgtgatggaggacggcgaaggccgccagatcgatttccgcaacacgctgattctgctc
accaccaacgccggtaccgagctcatcgcgcgcacctgcagcgacccgcaggccctgccc
gacccggacacggtggccagccagctgcgccagccgctgctggaaatcttcccgccggcg
ctgctcggccgcctggtgaccatcccctactacccgctcagcgacgccatgctcaaggcc
atcacccgcctgcaactggagcgcatccgcaagcgcgtggaaggcacgcacaaggtcggc
ttcgcctacgacgaaggggtggtggagctgatcgtctcgcgctgcagcgaaaccgaaagc
ggtggccgcatgatcgacgccatcctcaccaacggcctgctgccggacatgagccgcgag
ttcctcacccgcatgctcgaaggcaagccgctggccagcgtgcgcatcagccgccgcgac
aacgacttgcactatgacttcggcgcagccgactga
DBGET
integrated database retrieval system
