Pseudomonas inefficax: RIN61_05425
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Entry
RIN61_05425 CDS
T09811
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pix
Pseudomonas inefficax
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
WNN40746
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All DBs
Position
1218398..1222753
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AA seq
1451 aa
AA seq
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MSDALWAAREGDALMHTSMLADIVGGVLEIAATVAIGALATAAVAAAFGLTVATGGLGCF
VLGAVVGLVVGVVMAKTGADTGLSRLCEGIGNFLFPPSVQATIISGSPNTRTNGMRAARA
AGIVTGPPAPLEQAGAEAGEAKEESFLDMAKGFFSQMWRPTVATPAANTLPAPDDKVLCS
KHPPMPPQYLAEGSSKVLINGHPACRSGDRSTCEAVIVDGGLVSSNVRIGGEPIVVREIR
SGKTPGIGLAVTALMLLRGRGGKFYSKFGCMLVGGVSSVVTGQVTSALTQAMAGSPNPVH
AATGGKVLCGDEDLDFTVQATLPIAWQRLYNSHDERVDGLFGAGWSLPYEVSVEVSEDDH
LVLVDEQARRVDMGIITLGDAVFSVGEGLSVRRAHNGELLTESREGEYRLFQPTPGRPDR
LRLSQIGDRNDNRIYLDYDNQGRLCQLRDTFDQVRVRLGYSEQWPQRVSHVDFHAASGES
QRLASYGYDANGDLAQVLDGASQPLRGFAYDAARRMIEHRTGGGLCCNYEWAQHEDGWRV
VRHWTNGGDSYAFEYDVAAGITRVTDSLGRVAVRHWNPQYQITAYTDALERTWRFEWNDE
RQLLAASDPMDGRWQFFYDESGNLAETVDPLGRSESTEWLEHWSLPRSQTDQAGHRWTFA
YDQRGNCTRETDPLGQHTRYRHDSQGNPVEIIDANGSSRHLRWNEQGLLVEQRDCSGYLT
RFTYDTLGHLRSITDAQGERTDYQHDSKGRLRSVTLPDGRSEAFALDASGLLAQHIDTAG
HVTQYRRNRRGQLELRIDALGRQVRYQYDNHGRLLALYNENGEAYGFEWDAGDRLIAERD
LDGGLRRYQYDPLDNLVQVTFLPAPGSTEAPIVHRMAYDAGGRLLTRHTDEGRTDYCNDP
LDNVVAIRRTAVDGQVEELGFAFDALSQLLEEHSAQGSVQYQYDPLGNVTRTRVPDGRWI
NRLYYGSGHLHQINLDGKVVCDFERDRVHRETLRLQGNLAIQRQYDRGGRLRTLLRRPAT
QPSQLPAPDQQRYQFDAADQLAVREVQHPGSGYLQAYQHDGCGHVLGRQDSPAGQREAFR
YDPAGNLLDPLAAGAGLVRHNRVLTFEDKRYRYDGFGRLVEKRSRRRGTQHFRYDAEHRL
VQVRNLQPGRERIIDMRYDPMGRRTEKIESTLDGQVVSRTRFSWSGLRLLGEQHNGRQAL
YLYEDDGHEPLARVDGLGTHQQVLHYHNDINGLPEQLTDDAGEEVWSARYLTWGASWDEQ
RATRLPEEQNLRFQGQYLDRETGLHYNLFRFYDPEIGRFTQPDPIGLAGGLNLYEFAPNP
FTWIDPWGLLKEGESAGFGTDAHKKDGHDAHEIMRHKFMQDKGIATTNRVKGNPAMALKR
SNHTMVHDEERRLRALRGLGPNQMLKRGKLEIRLMSEAIYNTLVTRNIVTQDQLRTARRL
ARSYAKSKGCY
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccctgtgggccgcccgcgaaggcgacgcgcttatgcacacctcgatgctg
gcggacattgtcggcggtgtactggaaatcgccgccaccgtggccatcggcgccctggcc
actgccgccgtggcggcagcgttcggcttgaccgtggccaccggtggcctgggctgcttc
gtgctgggcgcggtggttggcctggtggtcggtgtggtcatggccaagaccggcgccgat
accggcctgagccgattatgcgagggcatcggcaatttcctgttcccgccgtcggtgcag
gccaccatcatcagtggctcgccgaacacccgcaccaacggcatgcgcgcggcacgtgct
gccggcatcgtcactggcccgccggcaccgctggagcaggccggcgccgaggctggcgag
gcgaaggaagaaagtttcctggacatggccaagggcttcttctcgcagatgtggcggccg
accgtggccacgcccgctgccaataccttgccagcaccggacgacaaggtactgtgcagc
aagcacccgccaatgccaccgcagtacctggccgaagggtcaagcaaggtgctgatcaat
ggccacccggcctgccgcagcggtgaccgcagcacctgcgaagcggtgatcgtcgacggt
ggcctggtatcgagcaacgtgcgcatcggcggtgaaccgatcgtggtgcgcgagatccgc
agcggcaagacgccgggcatcggcctggcagtgaccgcgctgatgctgctgcgcgggcgt
ggcggcaagttctacagcaagttcggctgcatgctggtgggcggggtgagcagcgtcgta
accggccaggtgaccagcgccctcacccaggccatggccggttcgcccaacccggtacat
gcggcgaccggcggcaaggtcctgtgtggcgatgaagacctcgacttcaccgtgcaggcc
accctgccgatcgcctggcaacgcctctacaacagccacgacgagcgggtcgatggcttg
ttcggcgcgggctggagcctgccttacgaagtttcggtagaggtcagcgaagacgatcac
ctggtgctggtcgacgagcaggcccgccgggtggacatgggcatcatcaccttgggtgat
gcggtgttcagcgtcggtgaagggctgagcgtacgccgggcgcacaacggcgagctgctg
accgaaagccgcgaaggcgagtatcggctgttccagccgaccccggggcggcctgaccga
ctgcgccttagccagatcggtgatcgcaacgacaaccggatctacctggactacgacaac
cagggccgcctttgccagttgcgcgataccttcgaccaggtgcgtgtccggctcggctac
agcgagcaatggccacagcgagtgagccacgtcgacttccacgcggcgagcggcgaatcg
caacgcttggccagctatggctatgacgccaacggtgacctggctcaggtgctggatggc
gcaagccagccgctgcgcggctttgcctacgacgccgcccgacgcatgatcgaacaccgt
actggcggcggcctgtgttgcaactacgaatgggcgcagcatgaggacggttggcgggtg
gtgcgacactggaccaacggcggcgacagctacgccttcgaatacgatgtggccgcaggg
atcacccgggtgaccgacagtcttggccgcgtcgccgtgcgccactggaacccgcagtat
cagatcaccgcctacaccgatgcactcgagcggacctggcgcttcgaatggaacgacgag
cgccagttgctcgcggcaagcgatcccatggatggacgctggcagtttttctacgatgag
tcgggcaatcttgccgaaacggtcgacccgctggggcgtagcgagtcgaccgagtggctc
gagcattggtcgctgcctcgcagccagaccgaccaggccggccaccgctggacattcgcc
tacgaccaacgcggcaactgcacgcgcgaaaccgacccgctaggccagcacacacgctat
cgccacgatagccagggcaaccctgtcgaaatcatcgatgccaatggttccagccgccac
ctgcgctggaacgagcaagggctgctggtcgaacagcgggactgctccggctacctgacc
cgcttcacctacgacaccttgggccacttgcgatcgatcaccgacgcccagggcgagcgc
accgactaccagcatgacagcaagggtcgcttgcgcagcgtgaccttgcccgatggccgc
agcgaagcgtttgccctggatgccagcggcttgttggcccagcacatcgacacggcaggt
catgttacccaataccggcgtaaccgccgcgggcaactggaactgcgcatcgatgcgctc
ggccggcaggtgcgctaccagtacgataaccatgggcgcctgctcgcgctgtacaacgaa
aatggcgaagcctacggtttcgaatgggatgcaggcgaccggctgatcgccgaacgcgac
ctggacggcggcttgcggcgctaccagtacgacccactggacaaccttgtccaggtgacc
ttcctgcctgcaccaggcagcacagaggcgcccattgttcatcgaatggcgtacgacgcc
ggcggtcgcctgctgacccgccataccgatgagggacgcaccgactactgcaacgaccca
ttggacaacgtggttgcgatccgccgtaccgccgtggatggccaggtcgaggaactgggc
ttcgccttcgatgcactgagccagttgctcgaagaacacagcgcgcagggcagcgtgcag
taccagtacgacccgctcggcaatgtcacccgcacgcgagtccccgacggccgctggatc
aaccgcctgtactacggcagcgggcacctgcaccagatcaacctcgatggcaaggtggtg
tgcgatttcgagcgtgaccgcgtacaccgggagacgctgcgtctgcagggcaacctggcg
attcaacgccagtacgaccgtggtgggcgcctgcgcactctgctgcgccgcccggcaacc
caacccagccagctgccggcgccagaccagcagcggtaccagttcgacgcggccgaccaa
ctggccgtacgcgaggtgcagcaccccggcagcggctatttgcaggcttatcagcatgat
ggctgcggccatgtgctggggcgccaggacagccctgccggccagcgcgaagcattccgc
tacgacccggccggcaacctgctcgacccgctggcagcaggtgccgggctggtccggcac
aaccgcgtgctcactttcgaggacaagcgctatcgctacgatggcttcggtcgcctggtg
gaaaagcgcagccgccgccgcggtacgcagcattttcgttacgacgccgagcaccggttg
gtccaggtgcgcaacctgcaacccgggcgggaacgcatcatcgacatgcgctacgacccg
atgggccggcgcaccgaaaaaatcgagtcgacgctcgacggccaggtggtcagccgcacc
cgcttcagctggagtggcctgcgcctgctcggcgagcagcacaatggccggcaggcgctg
tacctgtacgaggacgatggccacgaaccgctggcccgggtggacggcctgggtactcac
cagcaagtgctgcattaccacaatgacatcaacggcctgccggagcagttgaccgatgac
gctggcgaggaggtgtggtcggcgcgctacctgacctggggcgcaagctgggatgaacag
cgggctacccgtctgccggaagaacagaacctgcgcttccagggccagtacctggaccgc
gaaaccggcctgcactacaacctgttccgcttctacgacccggagataggccgctttacc
cagcctgacccgattggtctggccggtggtttgaacctttacgagtttgcgcccaacccg
tttacctggatcgacccatgggggctgctcaaagaaggcgaatccgcaggcttcggcacc
gatgctcataaaaaagacggccacgatgcccatgaaatcatgcgtcacaagttcatgcag
gacaaaggtatcgccacgactaaccgggtaaaaggcaacccggcaatggcgctcaagcgt
agcaaccacaccatggttcacgacgaggagcgccgcttgcgagcactacgagggctgggg
ccaaaccagatgctcaagcgcggcaaactggaaatccgactgatgtccgaagctatctac
aacacattggttacccgtaatatcgtgacccaggaccaactccgcaccgccaggcggcta
gcccggtcatatgcaaaaagcaagggatgttattga
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integrated database retrieval system
