Pseudomonas inefficax: RIN61_06180
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Entry
RIN61_06180 CDS
T09811
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pix
Pseudomonas inefficax
Pathway
pix03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RIN61_06180 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_06180 (ung)
Enzymes [BR:
pix01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RIN61_06180 (ung)
DNA repair and recombination proteins [BR:
pix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RIN61_06180 (ung)
Prokaryotic type
RIN61_06180 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WNN40891
LinkDB
All DBs
Position
complement(1391811..1392503)
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AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRAEFDQPYMHQLREFLRSEYAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRIIQVVSEQCPNVVFLLWGSHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRANTFLEQRGLAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaggccgccttgcgcgccgaa
ttcgaccagccctacatgcatcagttgcgcgagttcctgcgcagcgagtacgccgccggc
aaagagatctacccgccagggccgttgatcttcaatgcgctcaactcgacgccgctggac
caggtgaaggtggtcatccttggccaggacccttaccacgggccgggccaggcgcatggc
ctgtgcttctcggtgcagccgggcgtggccacgccaccgtcgctggtcaacatctacaag
gaactgcagcgcgacctgaacattccgattgccagtcacggctacttgcagagctgggcc
gagcagggcgtgctgttgctcaacacgaccatgaccgtggagcgcgccaatgccgcgtcg
catgccaagaagggctgggagttctttaccgaccggatcatccaggtggtcagcgagcag
tgcccgaacgtggtgttcctgctgtggggctcgcatgcgcaaagcaagcagaagctgatc
gacgggaccaagcacctggtgctgaaatcggtgcatccgtcgccgttgtcggcttaccgt
gggttcctggggtgcgggcatttcagccgggccaacacgttcctcgaacagcgtgggctg
gcgccgatcaactgggcgttgccaccattgtaa
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integrated database retrieval system
