Pseudomonas inefficax: RIN61_06200
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Entry
RIN61_06200 CDS
T09811
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pix03009
]
RIN61_06200
Enzymes [BR:
pix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RIN61_06200
Ribosome biogenesis [BR:
pix03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RIN61_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WNN40895
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All DBs
Position
1394699..1395391
Genome browser
AA seq
230 aa
AA seq
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MRLDRFLANLPSHNRQQVRLMLAQRRVRVDGQVVSDPLAEVREFSRVELDDQLLQAGRPA
RYLMLHKPAGCVSATQDPQHRTVLDLLPAALREDLHIAGRLDFNTTGLMILTNDGQWSRR
LTQPATKLPKHYLVETEDEIGEHYVARFLEGFYFAFEDLTTLPAQLDILGPRQARLAIVE
GRYHQVKRMFGHFDNKVVGLHRESMGAIRLDPGLPPGAFRELTADEIATV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgaccgtttcctcgccaacctgcccagccacaaccgccagcaagtccggctc
atgctcgcgcaacgccgtgtgcgggtggatggccaggttgtcagcgacccactggccgaa
gtgcgcgaattcagccgcgtggagctggacgaccagctgctgcaggcaggccgcccggcg
cgctacctgatgttgcacaagcccgcaggctgcgtcagcgccacccaggacccgcaacac
cgcaccgtgctcgacctgctgccagccgcgttgcgtgaggacctgcacattgccgggcgg
ctggacttcaacaccaccggcctgatgatcctgaccaacgatggccaatggtcacggcgg
cttacccagcccgcgaccaagctgccgaagcattatctggtggaaaccgaggacgagatt
ggcgagcactatgtggccaggttcctcgaaggtttctacttcgccttcgaagacctcacc
accctgcccgcccagctggacatcctcgggccgcgccaggcgcggctggcgatcgtcgaa
gggcgctatcaccaggtgaagcgcatgttcggccatttcgacaacaaagtggtggggttg
catcgggagagcatgggggcgatccggctggacccggggttgccaccgggggcgttccgt
gagctgacggcggatgaaatagcgacagtctag
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