Pseudomonas inefficax: RIN61_06860
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Entry
RIN61_06860 CDS
T09811
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00470
D-Amino acid metabolism
pix00550
Peptidoglycan biosynthesis
pix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RIN61_06860 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RIN61_06860 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pix01011
]
RIN61_06860 (murD)
Enzymes [BR:
pix01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RIN61_06860 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pix01011
]
Precursor biosynthesis
Amino acid ligase
RIN61_06860 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WNN41023
LinkDB
All DBs
Position
complement(1539699..1541045)
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AA seq
448 aa
AA seq
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MSMIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELDTLRRDYPQVEVRCG
ELDVDFLCRASELYVSPGLALATPALQQAAARGVKLSGDIELFARNAKAPIIAISGSNAK
STVTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDVELYVLELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRACWTFGLNQPD
FKAFGLREVNGEKYLAFEFQALMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLEAL
REFGGLAHRCQWVRERNGVNWYDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAD
FAALREPVQRFCRAVVLLGRDAERLAEALGDGVQLVRVKTLDDAVQQCAELAQAGDAVLL
SPACASLDMFKNFEERGRLFAQAAGGLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatgatcgcttccgaccaattccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgagccggggcattgcctttgcggtcgccgacacccgcgag
caaccgccggaactggacaccctgcgccgtgattatccgcaggtggaagtgcgctgtggt
gaactggatgtggacttcctgtgccgcgccagcgagctgtacgtgagccccggcctggcc
ctggccaccccggccctgcagcaggcggccgcgcgtggcgtgaagctgtccggcgacatc
gagctgttcgcccgcaacgccaaggccccgatcattgccatcagcggttccaacgccaag
agcaccgtcaccaccctggtcggcgaaatggccgccaaggcgggcaagcgcgtggcggtg
ggcggcaacctcggtaccccggcgctggatctgctggctgatgacgtcgagctctacgtg
ctggaactgtccagcttccagctggaaaccaccgaccagctcaacgctgaagtggccacc
gtgctgaacatcagcgaagaccacatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccggatcttccgtggcgcccgccaggtcgtggtcaaccgccaggacgccctg
agccggccgctgccggtggaaggccgcgcatgctggaccttcggcctcaaccagccggac
ttcaaggctttcggcctgcgcgaagtgaacggcgaaaaatacctggcgttcgagttccag
gcgctgatgccggcacgtgagctgaaggttcgcggcgcccacaaccagagcaacgccctg
gcggcgctggccctggggcatgctgccggcctgccgttcgaaccgatgctcgaggcgctg
cgcgagttcggcggcctggcccaccgttgccagtgggtgcgcgagcgcaatggcgtgaac
tggtatgacgattccaaggccaccaacgtcggtgctgccctggcggccatcgaaggcctg
ggtgccgacatcgaaggcaagctggtgctgatcgccggtggcgatggcaagggcgccgac
ttcgccgcgctgcgcgagccggtccagcgcttctgccgcgccgtggtgctgcttggccgt
gatgccgagcgcctggccgaagccctgggcgatggcgtgcaactggtccgcgtcaagacg
ctcgacgacgccgtacagcaatgcgccgaactggcccaggcgggtgatgccgtgctgctg
tcgccagcgtgcgccagcctcgacatgttcaagaacttcgaagaacgcgggcgcctgttc
gcccaggcagcgggaggccttgcatga
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