KEGG   Pseudomonas inefficax: RIN61_07530
Entry
RIN61_07530       CDS       T09811                                 
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
pix  Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:pix00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pix03016]
    RIN61_07530 (trmA)
Enzymes [BR:pix01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     RIN61_07530 (trmA)
Transfer RNA biogenesis [BR:pix03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    RIN61_07530 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_11 Cons_hypoth95 Methyltransf_12 MTS DREV RrnaAD pP_pnuc_1 Methyltransf_15 Trp_halogenase TRM5-TYW2_MTfase PrmA Ubie_methyltran
Other DBs
NCBI-ProteinID: WNN41147
LinkDB
Position
1677834..1678919
AA seq 361 aa
MSAAFDPSSYTTQLDAKVARLRELLAPFGAPEPAVFDSPREHYRLRAEFRLWREDGQRHY
AMFAPGEKHKAILIDDFPIASQRINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMI
TLCYHRPLDEAWETAARQLAEELGVSIIGRSKGKRLVIGRDYAVEKLDVAGRVFSYRQPE
GAFTQPNGAVNQKMLSWAFEAIGERDDDLLELYCGNGNFTLPLATRVRQVLATEISKTSV
NAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYEFGTVFVDPPRAGM
DPDTCELTRRFERILYISCNPETLAANIAQLQDTHRIERCALFDQFPYTHHMESGVLLVR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagtgctgctttcgacccctcctcctacaccacgcagctggacgccaaggtggctcgg
ttgcgcgagctgctggcaccgttcggcgcgccggagccggctgttttcgactcgccgcgc
gagcattaccgcctgcgcgccgagttccgcctgtggcgcgaggatggccagcgccactac
gccatgttcgccccgggcgaaaagcacaaggcgatcctgatcgacgacttccccatcgcc
agccagcgcatcaatgcactgatgccgcgcctgaaggcggcctggcaggccagcgaggag
ctgggcaaccgcctgttccaggtggagttcctgaccactctggccggcgatgccatgatc
accttgtgctaccaccgcccgctggacgaggcctgggaaacggccgcacggcagctggcc
gaagagctgggcgtgagcatcatcggccgctccaagggcaagcgactggtcatcggccgt
gactacgcggtggaaaaactcgacgtcgctggccgtgtgttcagctaccgccagccggaa
ggcgcgttcacccagcccaacggcgcagtgaaccagaagatgctgagctgggccttcgag
gcgattggcgagcgtgacgacgacctgctggagttgtattgcggtaacggcaacttcact
ctgccactggccactcgggtgcgccaggtgctggccacggaaatcagcaagacctcggtc
aatgccgcgctgagcaacctcgacgagaacgctgtggataacgtgcggctggtgcgcctg
tcggcagaagagctgactcaggcgctgaatgaggtgcggccgttccgtcggctggaaggc
atcgacctgaagagctacgagttcggtacggtgttcgtcgacccgccacgggcggggatg
gacccggatacctgcgagctgacccggcgtttcgagcggatcctgtacatctcgtgcaac
ccggagacgctggcagcgaacattgcccagttgcaggatacgcaccgcatcgagcggtgt
gcgttgtttgaccagttcccgtatacccaccatatggagagtggggtgctgctggttcgg
cgttga

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