Pseudomonas inefficax: RIN61_07675
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Entry
RIN61_07675 CDS
T09811
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pix
Pseudomonas inefficax
Pathway
pix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RIN61_07675 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_07675 (recC)
Enzymes [BR:
pix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RIN61_07675 (recC)
DNA repair and recombination proteins [BR:
pix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RIN61_07675 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WNN41176
LinkDB
All DBs
Position
complement(1710791..1714273)
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AA seq
1160 aa
AA seq
DB search
MPNTTHLHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPRDDDQGGCGIAAAIDVQLPGSFMWQLYRSVLGRDEIPEVSLLDKAPLTWRLMRLLPAL
IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGEHILNTARGE
RKALPAGNRWQAELWRALLDDVGEQGMEQSRAGVHQRFIERINSLEQAPAGLPARVIIFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLQL
DDQSLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSDGSPTTLLSQL
QDDILELRPLAETRERWQPVEPAKDRSIRFHIAHSPQREVEILHDQLLARFSADPTLRPR
DVIVMLPAIDTYAPHIRAVFGQLQRNDPRYIPFTLADQGQRGREPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLNAEQRASLGLPAGLEQNS
WRFGLRRMLLGYAVGVGEACDGIEPYDEIGGLDAALIGPLVALLDALEVASQALSEPATV
SQWGERLHALLQVFFLAEGERDEFLLMQLQDLRDSWLEVCEAVGLQDPLPLTVVREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQQPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLAAGWQLAT
VEPGQPAEPGEQLLHALTQEHPLQPFSPRYFQKDSPLFSFAHEWQVLHQQGHEEEQGDPG
LPPYHADEALSLAQLSDFLRHPVRHFFSQRLKVYFEALAAPTPDEEPFVLDTLQRYGASE
SLLGAALAEPDNAEQALQAQARRLQACGVLPLAGFGELLQRELIEPLPDLLQRHRQLLQR
WPQLVEGALPVHFEHGSHCLEGWLGRVFQADDQSLLSITTVPNTISAGRNALKWHRLIAP
WVTHLAACAAGYPYNSALVASDLTLLLAPLPQAQAAQLLGDLLVARQAAMNAPLPVAAKT
AFAWLAQDDSDKALAAAARAYEGDERTSFGERSESIALARQYRDFAALTADETFEGWCEA
LYRPLFNAPWQALGNPEKGA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacaccactcacctccaccccggcttcatgatcgtccacggcaaccgcctcgac
gacctgcgcagcctggtggtgagctggatgcgtcgttatcccctggcgcccctggaaaac
gaaatcgccctggtgcaaagcaatggcatcgctcaatggctcaagctggcccttgccgaa
gaccctcgggacgatgaccagggcggctgcggcatcgctgcggccatcgacgtgcaactg
ccaggcagcttcatgtggcagctgtaccgcagcgtgctgggccgcgacgaaattcccgaa
gtctccctgctcgacaaggcaccgctgacctggcgcctgatgcgcctgcttccggctctg
atcgaacgcccgcatttcgagccgctgcggcgcttcctcaccgacgacagcgacctgcgc
aagcgctaccagctcgccgagcgcctggccgacctgttcgaccagtatcaggtctaccgc
gccgactggctcaaggattgggccgctggcgagcatatcctcaataccgcccgcggcgag
cgcaaggcgctgcccgcgggcaaccgctggcaggccgaactgtggcgtgcattgctggat
gatgttggcgagcaaggcatggagcaaagccgcgccggggtacatcagcgtttcatcgaa
cggatcaacagcctggagcaggcacctgccggtctgccggcccgggtgatcatatttggc
atatcctcgctgccagcccaggcccttgaggcactggcgggcctggcacgcttcagccag
gtgctgctatgtgtgcacaacccctgccgccaccactgggccgatatcgttgccgacaag
gacctgctgcgccaccagtacaagcgccagcaacgcaagcagggcatgcccttgcagctg
gacgaccagtcgctgcaccagcatgcccaccccttgctggctgcctggggtaaacaaggc
cgcgactacatcaacctcctcgacagctacgatgaccctggcagttaccagggcgtattc
agcgacggccgcattgacctgttcagtgacggctcgcccaccacgctgctcagccagttg
caggacgacatcctcgagctgcgcccgctcgccgaaacccgcgagcgttggcaaccagtc
gagccggcgaaggaccgctcgatccgcttccacatcgcccacagcccgcaacgtgaagtg
gagatccttcacgaccagctgctggcccggttcagcgccgacccaaccctgcgcccacgt
gatgtgatcgtcatgctgccggccatcgatacctacgcgccgcatattcgcgccgtattc
ggccagttgcagcgcaacgatccgcgctacatcccgttcaccctggccgaccagggccag
cgtggccgcgaacctttgctgattgctctcgagcacctgctcaaactgccggacagccgc
ttcgcggtcagcgaagtgctcgacctgctggacgtgccggcagtccgcgcccgtttcggc
attcgtgaaaacgacctgcccaccttgcaccgctggatcgagggggccggcatccgctgg
ggcctcaatgccgagcagcgggccagcttgggcctgcccgcagggctggaacagaacagc
tggcggttcggcctgcggcgcatgctgctgggttatgccgtaggcgtgggcgaggcctgt
gacggcatcgaaccctacgatgaaatcggtggcctggatgcggcactgatcggcccgctg
gtcgcattgctcgacgccctcgaagtagccagccaggccttgtccgagcctgccactgtc
agccagtggggcgagcggctgcatgccttgctgcaagtgtttttcctggccgaaggcgag
cgcgacgagttcctgctgatgcagctgcaggatctgcgtgacagctggcttgaagtgtgc
gaagccgtcggtctgcaagacccattgccgctgaccgtagtgcgcgaagcctggctctcg
ggcctcgaccagggcaagttgtcccagcgcttcctcgccggctcggtcaacttctgtacc
ctcatgccgatgcgcgccatcccgttccgggtggtctgccttctgggcatgaacgacggc
gattatccccgcgcccagcagccgctggacttcgacctgatggccagcgactaccgccct
ggtgaccgctcgcgccgtgaggatgaccgctacctgctgctcgaagcgctgttatcggcc
cgcgaccagctgtatgtcagctgggtcgggcgcagcatccgcgacaacagcgaacgcccg
gcctcggtcctgatcggccagttgcgcgaccaccttgccgccggctggcagctggcaact
gtggagccggggcagccagcagagccgggcgagcaactgctgcacgcactgacccaggag
catccgctgcaacctttcagcccacgttacttccagaaagacagcccgctgttcagcttt
gctcacgaatggcaggtactgcaccagcaaggccacgaagaggagcagggtgaccccggc
ctgccgccttatcatgctgatgaggctttgagcctggcccagttgagtgatttcctgcgc
caccctgtgcggcacttcttcagtcagcgcctgaaggtgtacttcgaagcgctggcagca
ccgaccccggacgaggaacccttcgtcctcgatacgctgcaacggtacggcgccagtgaa
agcctgctgggtgcagcgctggccgagccggacaatgccgaacaggccctgcaggcccag
gcccggcgcttgcaggcctgcggcgtgctgcccctggccggcttcggcgagctgctgcag
cgcgagctgatcgaacccctgccagacctgctgcaacgccaccgccagttgttgcaacgc
tggccacagctggtcgagggggcattgcctgtgcatttcgagcacggctcgcactgcctc
gaaggctggcttgggcgggtgttccaggcagatgaccagagcctgctcagcataaccacg
gtccccaacaccatcagtgccgggcgtaacgccctcaagtggcaccgcctgatcgcgccc
tgggtcacgcacctggcggcctgcgcggcgggctacccctacaacagcgcactggtggcc
agcgacctgaccctgctgctcgcgccactgccgcaagcgcaggcggcgcagttgctgggc
gacctgctggtagcccgccaggcggcgatgaatgcgccattgccggtcgcggccaagact
gcgttcgcctggctggcccaggacgatagcgacaaagccctggctgctgcagcccgcgcg
tacgaaggtgacgagcgcaccagcttcggcgagcgcagtgaaagcatcgccctggcccga
cagtatcgcgatttcgccgctctcaccgctgatgaaaccttcgaaggttggtgcgaagcc
ttgtaccgcccattgttcaacgccccgtggcaggccctgggcaacccggagaaaggcgca
tga
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