Pseudomonas inefficax: RIN61_07965
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Entry
RIN61_07965 CDS
T09811
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00220
Arginine biosynthesis
pix00240
Pyrimidine metabolism
pix00250
Alanine, aspartate and glutamate metabolism
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RIN61_07965 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RIN61_07965 (carB)
00220 Arginine biosynthesis
RIN61_07965 (carB)
Enzymes [BR:
pix01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RIN61_07965 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
RimK
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WNN41225
LinkDB
All DBs
Position
complement(1776411..1779632)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAM
ADATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEAYAVLEKLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLP
RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGACGLDPKVDLASPEA
SSILKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVKTLA
LSSIDKDYMLRLKRKGFSDQRLAKLLGITDKNLRRHRHKLEVFPVYKRVDTCAAEFATDT
AYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKGVIVHYGGQTPLKLARALEEAGVPI
IGTSPDAIDRAEDRERFQQMVQRLNLLQPPNATVRSEEEAISAAGGIGYPLVVRPSYVLG
GRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQH
IEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVGLMNVQLALQGDKIYVIE
VNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQEIIPNFYSVKEAVFPFAKFP
GVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPQVAGVA
RDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPHVVDMIKNDEVSLIINTTEGRQ
SIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatatcaaaagcatcctgattctcggcgctggcccgatcgtgatc
ggccaggcctgcgaattcgactactccggcgcccaggcctgtaaagccctgcgcgaggaa
ggtttccgcgtcatcctggtgaactccaacccggccaccatcatgaccgacccggccatg
gccgacgccacctacatcgagccgatcaagtggcagtcggtggccaagatcatcgagaaa
gagcgcccggacgccgtcctgccgaccatgggtggccagaccgcactgaactgcgccctg
gacctcgagcgccacggcgttctggaaaagttcggcgtagagatgatcggtgccaacgcc
gacaccatcgacaaggctgaagaccgttcgcgcttcgacaaggccatgaaggacatcggc
ctggagtgcccgcgctccggtatcgcccatagcatggaagaggcctatgcggtcctcgag
aagctcggcttcccgtgcatcatccgcccgtcgttcaccatgggcggcactggcggtggt
atcgcctacaaccgtgaagaattcgaagaaatctgcacccgtggcctggacctgtcgccg
accaaggaactgctgatcgacgaatcgctgatcggttggaaagaatacgagatggaagtg
gtccgcgacaaaaaggacaactgcatcatcgtctgctcgatcgagaacttcgacccgatg
ggcgtgcacaccggtgactcgatcactgttgccccggcgcagaccctgaccgacaaggaa
taccagatcatgcgcaacgcctcgctggcggtgctgcgtgaaatcggtgtggaaaccggc
ggttccaacgtgcagttcggtatctgcccgaacacaggccgcatggtcgtgatcgagatg
aacccgcgcgtttcgcgttcctcggcgctggcttccaaggctaccggcttcccgatcgcc
aagatcgccgccaagctggccatcggttacaccctcgacgaactgcagaacgacatcacc
ggcggtcgtaccccggcatccttcgagccgtcgatcgactacgtcgtcaccaaactgcca
cgcttcgcctttgagaaattcccgaaagccgacgcccgcctgaccacccagatgaaatcc
gtgggtgaagtcatggccatcggtcgtaccttccaggagtccctgcagaaagccctgcgc
ggcctggaagtcggcgcctgcggtctcgacccgaaagtcgacctggccagcccggaagct
tccagcatcctcaagcgcgagcttaccgtgccaggtgccgagcgtatctggtacgtcgcc
gacgccatgcgttcgggcatgacctgcgaagaaatcttcaatctgaccggcatcgacatg
tggttcctggtgcagatggaagacctgatcaaggaagaagagaaggtcaagaccctggcc
ctgtcgtcgatcgacaaggactacatgctgcgcctcaagcgcaagggcttctctgaccag
cgcctggccaagctgctgggtattaccgacaagaacctgcgccgtcaccgccacaagctg
gaagtgttcccggtgtacaagcgcgtcgatacctgcgctgccgaattcgccaccgacacc
gcctacctgtactccacctatgaggaagagtgcgaggccaacccgtcgacccgcgacaag
atcatgatcctgggtggcggccctaaccgtatcggccagggtatcgagttcgactactgc
tgcgtacacgctgcactggcgctgcgtgaagatggttacgagaccatcatggtcaactgc
aacccggaaaccgtctccaccgactacgacacctccgaccgcctgtacttcgagccgctg
accctggaagacgtgctggaagtatgccgcgtcgagaagccgaaaggcgtgatcgtccac
tacggcggccagaccccgctgaaactggcccgtgccctggaagaagccggcgtaccgatc
atcggtaccagcccggacgccattgaccgcgccgaagaccgcgagcgcttccagcagatg
gtgcagcgcctgaacctgctgcagccgccaaacgccaccgtgcgcagcgaagaagaagcc
atcagcgctgctggcggcatcggctacccgctggtcgtgcgtccgtcctacgtactgggc
ggtcgtgccatggaaatcgtctacgagctggacgagctcaagcgctacctgcgcgaagcc
gtacaggtgtccaacgacagcccggtcctgctcgaccacttcctcaactgcgccatcgag
atggacgtggatgcggtgtgcgacggcaccgacgtggtaatcggcgcgatcatgcagcac
atcgagcaggccggcgttcactccggtgattcggcgtgctcgctgccaccttactcgctg
agcaaggaagtgcaggacgaagtccgcgtacaggtcaagaaaatggccctggagctgggc
gtggtcggcctgatgaacgtgcagctggcattgcagggcgacaagatctacgtgatcgaa
gtcaacccgcgcgcttcgcgtaccgtgccattcgtgtccaagtgcatcggcacttccctg
gcgatgatcgcggcccgcgtcatggctggcaaaaccctgaaagagctgggcttcactcag
gaaatcatcccgaacttctacagcgtcaaggaagccgtcttcccgttcgccaagttcccg
ggggttgacccgatcctcggccctgagatgaaatcgaccggtgaagtcatgggtgtcggt
gacagcttcggtgaagccttcgccaaggcccagatgggagccagcgaagtgctgccgacc
ggcggtaccgcgttcatcagcgtgcgtgacgacgacaagccgcaagtggctggcgttgcc
cgcgacctgatcgccctgggcttcgaagtggttgcaactgccggcactgccaaggttatc
gaagcggctggcctgaaagtgcgccgtgtgaacaaggtgaccgaaggtcgcccgcacgtg
gtcgacatgatcaagaacgacgaagtgtcgctgatcatcaacaccaccgaaggccgccag
tcgatcgccgattcctactcgattcgtcgcaatgcgctgcagcacaagatttactgcacc
accaccattgcggccggtgaagccatctgcgaggcgctgaaattcggtccggaaaagacc
gttcgtcgtctgcaggatctgcatgcaggattgaaagcatga
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