Pseudomonas inefficax: RIN61_09385
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Entry
RIN61_09385 CDS
T09811
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pix
Pseudomonas inefficax
Pathway
pix02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIN61_09385 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_09385 (msbA)
Enzymes [BR:
pix01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RIN61_09385 (msbA)
Transporters [BR:
pix02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RIN61_09385 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA_29
DEAD
nSTAND3
AAA_30
NB-ARC
RsgA_GTPase
nSTAND1
NACHT
APS_kinase
DUF815
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WNN41497
LinkDB
All DBs
Position
complement(2084603..2086411)
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AA seq
602 aa
AA seq
DB search
MAETPRSAEHTSSLKIYFRLLSYVKPYVGIFLLSIIGFVIFASTQPMLAGILKYFVDGLS
NPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGSFLGNYFLAKVSLCLVHDLRVELF
NKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFGYLLWMNW
HLTLVMVAILPVIAVMVSVASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAY
EQQRFGKASQSNTDKQLQMTKTGSLYTPMLQLVIYTAMAALMFLVLFLRGDSTAGDLVAY
ITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLDEAPEVDSGTVEKERVDGRLEVRNL
SFTYPGTDREVLSDISFVAEPGQMIALVGRSGSGKSTLAALIPRFYHHDQGQILLDGVEI
EDYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDLAGAPRADIEAAAADAYAKEFVDRLP
KGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVM
QGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTHAELLAANGHYARLHAMGLDEPAKAD
IT
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacaccgcgatcggcggagcacacctccagcctgaagatctacttccggctg
ctgagctatgtgaaaccctatgtcggcattttcctgctgagcatcatcggtttcgtgatt
tttgcctcgacccagccgatgctggccgggatcctgaagtatttcgtcgatgggctgagc
aacccggaagcggtgttgttccccaacgtcccctacctgcgcgacctgcaactgctgcag
gcggtaccgctgctgatcatcctgatcgctgcgtggcagggcctgggctcgttcctcggc
aactacttcctggccaaggtttccctgtgcctggtgcacgacctgcgtgtggaactgttc
aacaagttgctggtgctgcctaaccgctacttcgacaaccacaactccgggcacctgatc
tcgcgcatcaccttcaacgtgaccatggtcaccggtgcggccaccgatgcgatcaaggtg
gtgatccgcgaaggcctgaccgtggtgttcctgttcggctacctgctgtggatgaactgg
cacctgaccctggtgatggttgccatccttccggtgatcgcggtaatggtcagcgtcgcc
agcaagaaattccgcaagcagagcaagaagatccaggtggccatgggtgacgtcacccac
gtcgcctcggaaaccatccagggctaccgcgtggtgcgcagcttcggcggcgaggcctat
gagcagcagcggttcggcaaggccagccagagcaacaccgacaagcagctgcagatgacc
aagaccggctcgctgtacacgccgatgctgcagctggtgatctacaccgccatggccgcg
ctgatgttcctggtgctgttcctgcgcggtgattccactgccggtgacctggtggcttac
attactgccgccggtctgttgcccaagccgattcgtcagctttcggaagtcagctccacc
atccagaagggcctggccggtgccgaaagcatcttcgaacaactggacgaagcacctgaa
gtggacagcggtaccgtcgagaaggagcgggtggacgggcgcctggaagtgcgcaacctc
agcttcacctacccgggtaccgatcgtgaggtgttgagcgatatcagcttcgtcgccgag
ccagggcagatgattgcactggtcggccgttccggcagtggcaagtcgaccctggcagcg
ctgatcccgcgcttctatcaccatgatcaggggcagatcctgctcgatggcgtggagatc
gaggactatcgtctgcgcaacctgcgtcgccacgtttcgcaggtgacccagcatgtcacc
ctgttcaacgataccgtggccaacaacatcgcctatggcgacctggccggcgccccgcgc
gccgacatcgaagccgctgcggccgatgcctacgccaaggagttcgtcgaccggctaccg
aaaggcttcgataccgaagtgggtgaaaacggcgtgctgctctccggtggccagcgccag
cgcctggccatcgcccgggcgctgttgaagaacgcgccgctgctgatcctcgacgaagcc
acctcggcgctggataccgagtccgagcggcatatccaggctgcactggaccatgtgatg
cagggccgtaccacgctggtgatcgcccaccgtctgtcgaccatcgagaaagccgaccag
atcctggtcatggaccagggccgcctggtcgagcgcggcacccatgccgagctgctcgcg
gccaatggccattatgcccgcctgcatgccatgggcctggatgagccggccaaggccgat
atcacctga
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