Pseudomonas inefficax: RIN61_10345
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Entry
RIN61_10345 CDS
T09811
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pix03021
]
RIN61_10345 (rpoH)
Transcription machinery [BR:
pix03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RIN61_10345 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
WNN41678
LinkDB
All DBs
Position
complement(2315694..2316548)
Genome browser
AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVHTVNSIPLLTVEQERDLGERLYYEQDVEAARQMVMAHLR
FVVHIARSYAGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLSGQD
MAFDPAAEADDDSAFQSPAHYLEDHRYDPAVQLEDADWSDNSTSNLHEALQGLDERSRDI
LYQRWLAEEKATLHELADKYSVSAERIRQLEKNAMNKVKALIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgttgcaacctgcctatgccctggtacccggtgcaaacctggaagcctac
gtgcacacggtcaacagcatcccgctgctgactgtcgagcaggagcgtgatctgggcgag
cgtctctattatgagcaggatgtcgaggccgctcgtcaaatggtgatggcccacctgcgt
ttcgtcgtacatatcgctcgtagctatgccggctacgggctggcccaggccgacctgatc
caggaaggcaacgtcgggttgatgaaagccgtcaagcgcttcaacccggaaatgggcgtg
cgcctggtttcgttcgccgtgcactggatcaaggcagagatccacgagttcatcctgcgc
aactggcgcatcgtcaaggtggccaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgacgaagtgcaccgcgtggcggaa
agccttggcgtggagccgcgtgaagtgcgcgagatggaaagccgcctcagcggccaggac
atggccttcgatccggcagcggaagctgacgatgacagtgccttccagtcgcctgcacat
tacctggaagaccaccgttacgacccggcggtgcagctggaggatgcagactggagcgac
aactccaccagcaacctgcacgaagcactgcaagggctggacgagcgtagccgcgatatt
ctctaccagcgctggttggcggaagagaaggccacgttgcatgagctggcggacaagtac
agcgtttcggccgagcgtattcgccagctggagaagaatgcgatgaacaaggtcaaggca
ttgatcgctgcttga
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