Pseudomonas inefficax: RIN61_10445
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Entry
RIN61_10445 CDS
T09811
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pix03009
]
RIN61_10445
Enzymes [BR:
pix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
RIN61_10445
Ribosome biogenesis [BR:
pix03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RIN61_10445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_15
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
UPF0020
FtsJ
PrmA
Methyltr_RsmB-F
Spermine_synth
Methyltransf_24
Anamorsin_N
TRM
MT-A70
DUF429
Motif
Other DBs
NCBI-ProteinID:
WNN41697
LinkDB
All DBs
Position
2336460..2337656
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRAGHLWVYSNEVDVSATPLQGFQAGQQAVLEAANGKPLGIVALS
PNNLICARLLSRDIKLPLDKSLLVHRLNVALSLRERLFDQPCYRLVYGDSDLLPGLVVDR
FFDILVVQLASATMEAHKDDVIAALVQVLKPSGILFKNDSAARDAEGLQRYVETVYGEVP
DWVPLEENGVKFEAPVREGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQAGA
FGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADP
PAFIKRKKDLKNGEAAYRRLNEQAMRMLSKDGILVSASCSMHLPEDDLHNILLTSSRHLD
RNMQLLERGGQGPDHPVHPAIAETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcccagcctacgcctcaaagccaacgccgaccgccgcctgcgcgccggccac
ctgtgggtctacagcaacgaagtcgacgtcagcgcgaccccgctgcaaggcttccaggcc
ggccagcaggctgttctcgaggcagccaatggcaagccgctgggcatcgtcgcgctgagc
ccgaacaacctgatctgcgcgcgcctgctgtcgcgtgatatcaagctgccgctggacaaa
tcgctgctggtgcaccgcctcaacgtcgccctgtcgctgcgcgagcgcctgttcgaccag
ccgtgctaccgcctggtctacggcgactccgacttgctgccaggcctggtggtagaccgc
ttcttcgacatcctcgtggtgcaactggcctcagccaccatggaagcgcacaaggatgac
gtgattgcagcgctggttcaggtgctcaagcccagcggcatcctgttcaagaacgattcc
gccgcgcgtgacgccgaaggcctgcagcgctacgtcgagaccgtttacggtgaagtcccg
gactgggtgccgctggaagagaacggcgtcaaattcgaagccccggtacgcgaaggccag
aagaccggctggttctacgaccaccgcatgaaccgtgcacgcctggcgccgtacgtgaaa
ggcaagcgcgtgctcgacctgttcagctacatcggtggctggggcgtgcaggccggcgcc
ttcggcgccagcgaagtgttctgcgtggatgcctcgggcttcgccctggacggcgtcgag
cgcaacgccgcgctgaacggcatcagcgagaagctgacctgcatcgaaggtgatgtgttc
gaagcccttcgcgaactgaaggccgccgaagagcgcttcgacgtgatcattgccgaccca
cccgccttcatcaagcgcaagaaggacctgaaaaacggcgaagcagcctaccgccgcctc
aacgagcaggccatgcgcatgctgagcaaggacggcatcctggtcagcgcatcgtgctcg
atgcacctgcccgaggacgacctgcacaacatcctgctgaccagctcccgccatctggac
cgcaatatgcaattgctcgagcgcggcggccagggcccggaccatccggtgcacccggcc
atcgccgaaacccgctacatcaagagcattacctgtcggttgctgcccaacagctga
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integrated database retrieval system
