Pseudomonas inefficax: RIN61_10800
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Entry
RIN61_10800 CDS
T09811
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_10800
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RIN61_10800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
HTH_Crp_2
HTH_IclR
HTH_5
MarR_2
WHD_phage_rep
HTH_1
Sigma70_r4_2
Rrf2
HVO_A0261_N
MarR
Sigma70_r4
HTH_Tnp_ISL3
DUF7343
HTH_23
TrmB
Phage_rep_O
LexA_DNA_bind
HVO_A0114
HTH_39
Fe_dep_repress
HTH_31
Replic_Relax
Motif
Other DBs
NCBI-ProteinID:
WNN41764
LinkDB
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Position
complement(2414808..2415278)
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AA seq
156 aa
AA seq
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MHSELDAYDRRILELLQEDASLSSAQIAERVGLSQSPCWRRIQRLKEEGVIRGQVTLLDR
KKVGLNTQIFAEVKLNAHGRSNFTEFTDAIRGFPEVLECYVLMGSVDFLLRIVTPDIEAY
ERFFFEKLSNVPGIQEVNSIVALSEIKSTTSLPLSR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgagctggacgcctacgaccgccgtatcctcgaactgctgcaggaggacgct
tcgctgtccagcgcgcagatcgccgaacgcgtggggctgtcccaatcgccgtgctggcgg
cgtatccagcggttgaaggaggagggggtgattcgcgggcaggtgaccttgctggatcgc
aagaaggtcggcctgaacacgcagatattcgccgaggtgaaactgaacgcccacgggcgc
tccaacttcaccgagttcaccgacgcgatccgtgggtttccggaggtgctggagtgttat
gtgctgatgggctcggtggactttctgttgcgcattgttaccccggatatcgaggcttat
gagcggttcttcttcgaaaagctgtcgaacgtgccggggatacaggaggtgaactcgatc
gtggcgctatcggagatcaagtccaccaccagcctgccactttcgcgttga
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