Pseudomonas inefficax: RIN61_10800
Help
Entry
RIN61_10800 CDS
T09811
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_10800
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
RIN61_10800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
HTH_Crp_2
HTH_IclR
HTH_5
HTH_1
Sigma70_r4_2
MarR_2
HTH_23
Rrf2
MarR
DUF7343
Sigma70_r4
TrmB
HTH_Tnp_ISL3
Phage_rep_O
LexA_DNA_bind
HTH_39
Fe_dep_repress
Replic_Relax
HTH_27
Motif
Other DBs
NCBI-ProteinID:
WNN41764
LinkDB
All DBs
Position
complement(2414808..2415278)
Genome browser
AA seq
156 aa
AA seq
DB search
MHSELDAYDRRILELLQEDASLSSAQIAERVGLSQSPCWRRIQRLKEEGVIRGQVTLLDR
KKVGLNTQIFAEVKLNAHGRSNFTEFTDAIRGFPEVLECYVLMGSVDFLLRIVTPDIEAY
ERFFFEKLSNVPGIQEVNSIVALSEIKSTTSLPLSR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgagctggacgcctacgaccgccgtatcctcgaactgctgcaggaggacgct
tcgctgtccagcgcgcagatcgccgaacgcgtggggctgtcccaatcgccgtgctggcgg
cgtatccagcggttgaaggaggagggggtgattcgcgggcaggtgaccttgctggatcgc
aagaaggtcggcctgaacacgcagatattcgccgaggtgaaactgaacgcccacgggcgc
tccaacttcaccgagttcaccgacgcgatccgtgggtttccggaggtgctggagtgttat
gtgctgatgggctcggtggactttctgttgcgcattgttaccccggatatcgaggcttat
gagcggttcttcttcgaaaagctgtcgaacgtgccggggatacaggaggtgaactcgatc
gtggcgctatcggagatcaagtccaccaccagcctgccactttcgcgttga
DBGET
integrated database retrieval system
