KEGG   Pseudomonas inefficax: RIN61_11005
Entry
RIN61_11005       CDS       T09811                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pix  Pseudomonas inefficax
Pathway
pix00300  Lysine biosynthesis
pix00470  D-Amino acid metabolism
pix01100  Metabolic pathways
pix01110  Biosynthesis of secondary metabolites
pix01120  Microbial metabolism in diverse environments
pix01230  Biosynthesis of amino acids
Module
pix_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pix00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RIN61_11005 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RIN61_11005 (lysA)
Enzymes [BR:pix01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RIN61_11005 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: WNN41801
LinkDB
Position
2457407..2458654
AA seq 415 aa
MNAFNYRDGELFAEGVGLSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRTGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtgggcctgtcggcc
atcgccgaacgctacggcactccgacctacgtgtactcgcgcgcccacatcgaggcccag
taccgcagctacgccgacgccctgcaaggcaccgagcacctggtgtgcttcgcggtaaag
gccaactccaacctcggcgtgctgaacgtgctggcgcgcctgggcgcaggcttcgacatc
gtttccggcggtgagctggagcgcgtgctggccgctggcggccgtgccgaccgcgtggtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgtgccctggaggtcggcgtgcac
tgcttcaacgtcgaatcaaccgacgaactggagcgcctgcaagtggtggccgccgagatg
ggcaaggttgccccggtctcgctgcgggtcaacccggatgtcgacgccggcacccacccg
tacatctccaccggcctgaaagagaacaagttcggcatcgccatcgccgatgccgaggcc
atctacgtgcgcgccgcgcagctgccgaacctggaagtggtcggtgtcgactgccacatc
ggttcgcaactgaccaccgtcgagcctttcctcgatgccctcgaccgcctgctggtgctg
gtcgaccgcttggccgagtgcggcatccacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgttaccgcgatgaggagccgccgctggtggccgactacatcaaggccatccgc
gagcgcgtcggcgaccgcgacctggccttggtgttcgagccgggccgctacatcgtggcc
aacgccggcgtcctgctgacccgcgtggaatacctcaagcacaccgagcacaaggatttc
gccatcatcgatgcggcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggcgtcagcgcagtcaagccacgcacaggggaaggccgtgcctatgacctggtcggcccg
atctgcgagactggcgacttcctcggcaaggaccgcgtactgaacctggccgaaggtgac
ctgctggccgtacagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgtggccgttgcgctgaaatcctggtcgacggcgaccaggccttcgaagtacgccgccgc
gagaccatcgccgaattgtacgctggcgaaagcctgctgccggagtaa

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