Pseudomonas inefficax: RIN61_11005
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Entry
RIN61_11005 CDS
T09811
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00300
Lysine biosynthesis
pix00470
D-Amino acid metabolism
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01120
Microbial metabolism in diverse environments
pix01230
Biosynthesis of amino acids
Module
pix_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RIN61_11005 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RIN61_11005 (lysA)
Enzymes [BR:
pix01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RIN61_11005 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WNN41801
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Position
2457407..2458654
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AA seq
415 aa
AA seq
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MNAFNYRDGELFAEGVGLSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVKPRTGEGRAYDLVGPICETGDFLGKDRVLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtgggcctgtcggcc
atcgccgaacgctacggcactccgacctacgtgtactcgcgcgcccacatcgaggcccag
taccgcagctacgccgacgccctgcaaggcaccgagcacctggtgtgcttcgcggtaaag
gccaactccaacctcggcgtgctgaacgtgctggcgcgcctgggcgcaggcttcgacatc
gtttccggcggtgagctggagcgcgtgctggccgctggcggccgtgccgaccgcgtggtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgtgccctggaggtcggcgtgcac
tgcttcaacgtcgaatcaaccgacgaactggagcgcctgcaagtggtggccgccgagatg
ggcaaggttgccccggtctcgctgcgggtcaacccggatgtcgacgccggcacccacccg
tacatctccaccggcctgaaagagaacaagttcggcatcgccatcgccgatgccgaggcc
atctacgtgcgcgccgcgcagctgccgaacctggaagtggtcggtgtcgactgccacatc
ggttcgcaactgaccaccgtcgagcctttcctcgatgccctcgaccgcctgctggtgctg
gtcgaccgcttggccgagtgcggcatccacctgcgccacctggacctgggtggcggtgtc
ggcgtgcgttaccgcgatgaggagccgccgctggtggccgactacatcaaggccatccgc
gagcgcgtcggcgaccgcgacctggccttggtgttcgagccgggccgctacatcgtggcc
aacgccggcgtcctgctgacccgcgtggaatacctcaagcacaccgagcacaaggatttc
gccatcatcgatgcggcgatgaacgacctgatccgcccggccctgtaccaggcctggatg
ggcgtcagcgcagtcaagccacgcacaggggaaggccgtgcctatgacctggtcggcccg
atctgcgagactggcgacttcctcggcaaggaccgcgtactgaacctggccgaaggtgac
ctgctggccgtacagtccgcgggcgcctatggttttgtcatgagctccaactacaacacc
cgtggccgttgcgctgaaatcctggtcgacggcgaccaggccttcgaagtacgccgccgc
gagaccatcgccgaattgtacgctggcgaaagcctgctgccggagtaa
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