Pseudomonas inefficax: RIN61_11165
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Entry
RIN61_11165 CDS
T09811
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pix03000
]
RIN61_11165
Transcription factors [BR:
pix03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RIN61_11165
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_IclR
HTH_20
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WNN41832
LinkDB
All DBs
Position
complement(2498084..2499010)
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AA seq
308 aa
AA seq
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MSRQLPPLYALRAFEAAARLSSFTRAGEELSITQSAVSRHIRTLEEHFACRLFVRSGRSL
QLTEAARVLLPGVREGFAALERACDTLRGEDDILRMKAPSTLTMRWLLARLSRFRHLQPG
NEVQLTSAWMDVDHVDFNQEPFDCAVLLSDGVFPPEWEVRKLFPELLIPVGAPDLLDEEP
WDERRLACIELLHPTVDKRDWREWLERMGLSDKVSLRGGQVFDTLELGMIAAARGYGISM
GDLLMVAEDVAQGRLSLPWPTAVPSGMDYYLVWPRTRRGGERLRRLSAFLEQEVAAMDLP
AVEVLPRL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcagctccccccgctgtatgccctgcgcgcattcgaagccgctgcgcggcta
agctccttcacccgcgccggcgaagagctgtcgattacccagagcgcggtcagccggcat
atccgcacactggaggagcactttgcctgccgcctgttcgtgcgcagcggccgcagcctg
caactgaccgaagcggcgcgggtgctgctgcccggcgtgcgcgaaggctttgccgcgctg
gaacgggcttgcgataccttgcgcggtgaggatgacatcttgcgcatgaaggccccctcg
accctgaccatgcgctggttgctggcgcgccttagccgctttcgccacttgcagcctggc
aacgaagtgcagctgaccagcgcctggatggatgtcgaccacgtggacttcaaccaggaa
cctttcgattgcgcagtgttgctcagcgacggggtgttcccgccagaatgggaagtgcgc
aagttgttcccggagttgttgatccccgtgggtgcgccagacttgctcgacgaggaaccc
tgggacgagcgtcggctggcctgcatcgagctgctgcaccccacggtggacaagcgcgac
tggcgggaatggttggagcgtatggggttgagtgacaaggtttcgctcaggggcgggcag
gtcttcgacacgctggagctgggcatgattgctgcggcgcgtggctacggcatttccatg
ggcgatttgctgatggtggccgaggatgtggcgcaggggcggttgagcctgccttggccg
acggccgtgcccagcggcatggattactacctggtgtggccacgcacccggcgcggcggc
gagcgcctgcggcggctgagcgcatttctcgagcaagaggtggcggctatggatttaccc
gctgtagaagtcctgccacgtctctga
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