Pseudomonas inefficax: RIN61_11905
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Entry
RIN61_11905 CDS
T09811
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pix03009
]
RIN61_11905 (rsmB)
Enzymes [BR:
pix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RIN61_11905 (rsmB)
Ribosome biogenesis [BR:
pix03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RIN61_11905 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
FtsJ
PCMT
MTS
Methyltransf_11
Methyltransf_23
Methyltransf_24
CMAS
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
WNN41975
LinkDB
All DBs
Position
complement(2657941..2659251)
Genome browser
AA seq
436 aa
AA seq
DB search
MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQ
LLQKPFKAADADVQALLLVGLYQLFYSRIPAHAAIGETVGCADKLKKPWAKGLLNAVLRR
AQREGEELLASMERDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHH
SRDAYLALLAEAGIGASACQYSRDGIVLTEACDVRGLPGFAEGWVSVQDEAAQLSADLLE
LAPGQRVLDACCAPGGKTCHLLEAEAGLAHVVAIDLEAKRLTRVRENLDRLQLDAELIAC
DARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIPALANLQGELLDALWP
TLEVGGMLLYATCSSLPTENTEVIDAFLARTPGARELDLATEAGLRQPHGRQLLAQEGGH
DGFYYAKLIKIAASRG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacgcctcgccgccgcccgtgcccttgcagctgtgctcagcggcaaggcctcg
ctgaacagctcgctgccggcgcaactggacaaggtcgatgaacgcgaccgtggcctgacc
caggacctggcgttcggcaccgcgcgctggcagccacgcctcgacctgctggccgcgcag
ctgctgcagaagccgttcaaggccgccgatgccgatgtgcaggcgctgctgctggtcggc
ctgtaccagctgttctacagccgtatcccggcccacgccgctatcggcgagaccgtcggc
tgtgccgacaagctgaagaagccgtgggccaagggcctgctcaatgccgtactgcgccgc
gcccaacgcgaaggcgaggaactgctggccagcatggagcgcgacccggtggtacgcact
gcccacccgcgctggctgcagaagtcgctgaaggccttctggccggagcagtgggaggcc
atctgcgccgccaacaacgcccacccgccaatgatcctgcgggtcaaccgccgccaccac
agccgtgatgcctatctggcactgctggccgaggcgggtattggcgccagcgcctgccag
tacagccgtgacggcatcgtgctgaccgaagcctgcgacgtacgcggcctgccaggcttt
gccgaaggctgggtgagcgtgcaggacgaagccgcgcagctgtccgccgacctgctggaa
ctggcccccggccagcgcgtgctcgatgcctgctgtgcaccaggcggcaagacctgccac
ctgctggaagccgaagccggcctggcccacgtggtggccatcgacctcgaagccaagcgc
ctgacccgggtgcgcgaaaacctcgaccgcctgcaacttgacgccgagctgatcgcctgt
gatgcccgcgacaccgccagctggtgggacggcaagccgttccagcgcatcctgctcgac
gcaccatgctcggccaccggcgtgatccgccgccatccggacatcaagctgacccgccag
gccgacgacatcccggccctggccaacctgcaaggcgagctgctcgatgccctgtggccg
actctggaagtgggcggcatgctgctgtacgccacctgctccagcctgccgaccgagaac
accgaagtgatcgatgccttcctcgcccgcactccgggcgcccgtgagctggacctggcc
accgaagccggcctgcgccagccccacggccgtcagttgctggcgcaggagggcggccac
gacggtttctactatgccaagctgatcaagatcgccgcctcgcgcggataa
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