Pseudomonas inefficax: RIN61_12240
Help
Entry
RIN61_12240 CDS
T09811
Name
(GenBank) EAL domain-containing protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RIN61_12240
Enzymes [BR:
pix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
RIN61_12240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CcmD
Motif
Other DBs
NCBI-ProteinID:
WNN42042
LinkDB
All DBs
Position
2722577..2724181
Genome browser
AA seq
534 aa
AA seq
DB search
MSAFIALLRQIFYRPWMLATLAALASAALLLSASIGIALQQMKQSESAQMNAQGERFLER
LEQVFGQLREGVDLLQAQPLRGCSPAMLTALQQVGLSSRFIYEAAYVDGDIACSNRGDER
AFEPLRIPDIQGPTYSYWLNTTTEPNENLAALMLGRGKFVVSTSRGHLTDVVDLPPGGSL
VVVLDNGTRAIPVLGPPQVWPPPSAWSTSHKSLLELSDRLIYRMPTKSPDYQLVLIAPRA
SLPLRMNGMLWLLFPGSVLAACCIGWLVLQLILQRRSMSSELQNALRRGELQVLYQPIFE
LDSRRCVGAEALVRWRRPDGTLTSPDLFIPLAENTGQIRQITDFVLQRVLEQLGQLLRSH
PNLYISVNLAACDVMVPRIGRVAARLLAMHRVAASQIAFEVTERGLIDVVVARDNLQALR
AVGHQVLIDDFGTGYCSLAYLQTLPVDCLKIDKAFIDALGHDAASSGVAPHIIRMAHDLH
LRVIAEGIECEDQAVLLNSEGVNYGQGWLFARPLNARQFAELVTRGRLPRRVEH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccttcatcgccttgctgcgccaaattttttaccgtccctggatgctggccaca
ttggcagcactggccagcgcggctctgttgctttctgccagtatcggcattgccctgcaa
cagatgaagcaaagcgagagtgcacagatgaacgcccaaggcgaacgctttctcgagcgc
cttgagcaggtgttcggccagttgcgcgaaggggtcgacctgttgcaggcgcagcccttg
cgcggctgcagcccggcgatgctgacggcattgcagcaggtaggcctgagctcacgcttc
atatatgaagcggcatacgtggatggtgatatcgcctgttcgaaccgcggtgatgagcgg
gcgttcgaacccttgcgcatccccgacatccaggggccgacttacagctactggctgaac
accacgaccgagccgaacgagaacctggccgcattgatgctggggaggggcaagttcgtg
gtgtccacctctcgtgggcacctgaccgatgtggtcgacctgcccccgggcggtagcctg
gtcgtggtgctggacaacggcacccgggctatccccgtgctgggccccccgcaggtatgg
ccgccaccctcggcctggtcgaccagccacaagtcgctgctcgaactcagcgatcgcctg
atctaccgaatgccgaccaagtcaccggactaccagttggtgttgattgccccgagggcg
agcctgccgttgagaatgaacggcatgctctggcttctgttccccggcagtgtgctggcg
gcctgctgcatcggctggctggtgttgcaactgatcctgcagcggcggtcgatgagctcg
gaattgcagaatgccctgcgtcgcggcgaactgcaggtgctctaccagccgatcttcgag
ctcgacagccggcgctgtgtcggggcggaggccctggtgcgctggcgtcgcccggacggc
accctgaccagcccggacctgttcatcccgttggcggaaaacaccgggcagatccgccag
atcaccgactttgtcctgcagcgtgtgctggaacagttagggcaactgctgcgctcgcac
cccaacttgtacatatcggtgaacctggcggcttgcgatgtgatggtgccgcgcattgga
cgggtggcggcacgcttgctggccatgcaccgggtagcggccagccagattgccttcgag
gtgaccgagcgcggcctgatcgatgtggtggtagcgcgcgacaacctgcaggcgctgcgc
gcggtggggcatcaggtgctgatcgacgattttggtacgggttattgcagcctggcctac
ctgcaaaccctgccggtggactgcttgaagatcgacaaggcttttatcgatgccctgggg
cacgacgccgccagcagcggtgttgcgccgcatatcatccgcatggcccacgacctgcac
ctgcgggtgattgccgaaggcatcgagtgtgaagaccaagcggtactgctgaacagcgaa
ggggtcaattatggccagggctggctttttgcccggccactgaatgcccggcagtttgcc
gaactggtgacccgcggacggttgccgcggcgggttgagcattga
DBGET
integrated database retrieval system
