Pseudomonas inefficax: RIN61_13100
Help
Entry
RIN61_13100 CDS
T09811
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00521
Streptomycin biosynthesis
pix00523
Polyketide sugar unit biosynthesis
pix00541
Biosynthesis of various nucleotide sugars
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01250
Biosynthesis of nucleotide sugars
Module
pix_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RIN61_13100 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RIN61_13100 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RIN61_13100 (rfbC)
Enzymes [BR:
pix01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RIN61_13100 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Peptidase_S49
Motif
Other DBs
NCBI-ProteinID:
WNN42299
LinkDB
All DBs
Position
complement(2932689..2933234)
Genome browser
AA seq
181 aa
AA seq
DB search
MNIIPTAIPDVLIIEPKVFCDSRGFFFEAFNAREFARQTGVNVEFVQDNHSRSIKGVLRG
LHYQVANTQGKLVRVVHGEIRDIAVDVRKSSPTFGQWVAVQLSADNHRQLWIPPGFAHGF
AVMSESAEFLYKTTDYYNPSADRCIRWDDPTLTIDWGLQQPPVLSDKDKLGLPLAEAELL
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatccccaccgcaattcctgatgtactgatcatcgagccgaaggtgttctgt
gacagccgtggttttttcttcgaggcgttcaacgcccgtgagttcgcccggcaaaccggc
gtgaatgtcgagttcgtccaggacaaccactcgcgctcgatcaagggtgtgctgcgtggt
ctgcactatcaggtggcaaacacccaaggcaagctggtgcgcgtggtgcacggggaaatc
cgtgatattgccgtggatgtgcgcaagagctcgccaaccttcggccaatgggtcgcggta
cagctgtcggccgacaaccatcgccagttgtggatcccacccggcttcgcccatggcttt
gcggtgatgagcgagtcggccgagttcctctacaagactaccgactactacaacccgagc
gccgaccgctgcatccgctgggatgacccgacactgaccatcgactgggggctgcagcag
ccaccggtgctgtcggacaaggacaagctcggcctgccgctggcagaggcggaactgctg
ccttaa
DBGET
integrated database retrieval system
