Pseudomonas inefficax: RIN61_13340
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Entry
RIN61_13340 CDS
T09811
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pix
Pseudomonas inefficax
Pathway
pix02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RIN61_13340 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_13340 (choX)
Transporters [BR:
pix02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RIN61_13340 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WNN37226
LinkDB
All DBs
Position
complement(2984241..2985185)
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AA seq
314 aa
AA seq
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MQRLIRRSLLSVALTTIVASPLYAAEPAACKNVRLGVVNWTDVIATSAMAQVLLDGLGYQ
TKQTSASQQIIFAGIRDKRLDMFLGYWNPIMTQTITPFVDAKQVKVLDKPSLEDARATLA
VPKYLADKGLKTFADIHKFEKELGGKIYGIEPGSGANTQIKAMITKNQFGLGKFQLVESS
EAGMLAAVDRAVRRNEAVVFFGWAPHPMNVNIDMVYLGDSQDALGPDEGRATVWTVTAPD
YAERCPNAHRLLANLNFSAEDESRMMQPLLDHKDALESARQWLKDHPEDKARWLEGVTTF
DGKPAADNLKLTAN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcttgatccgccgcagcctgttatccgtagccctgaccactatcgtcgcttcc
ccgctgtatgccgcggaacccgcggcctgcaagaacgtccgtctgggcgtggtcaactgg
accgatgtcatcgccaccagcgccatggcgcaggtgctgctcgatggccttggctaccag
accaagcagaccagcgcttcgcagcagatcatcttcgccggcatccgcgacaaacgcctg
gacatgttcctgggttactggaacccgatcatgacccagaccatcactccgttcgtcgac
gccaaacaagtcaaggtactcgacaaacccagcctggaagacgcccgtgccaccctggcg
gtgcccaagtacctggccgacaagggcctgaagacgttcgccgatattcacaagttcgaa
aaggaactgggcgggaaaatctacggcatcgaaccaggctccggcgccaacacccagatc
aaggcgatgatcaccaagaaccagtttggccttggcaagttccagctggtcgaatccagc
gaggccggcatgctcgccgccgtcgaccgcgcggtgcggcgcaacgaagctgtggtgttc
tttggctgggcaccgcacccgatgaacgtgaatatcgacatggtctatctgggcgacagc
caggacgccctgggccctgacgaaggccgcgcgacagtgtggacggtgactgcgccggac
tatgccgaacgctgccccaacgcccaccgcctgctggccaacctgaacttcagcgccgag
gacgagagccgcatgatgcagccgctgctcgaccacaaggacgcgctggaatcggcccgc
cagtggctcaaggaccaccccgaggacaaggcccgctggctggagggtgtgaccaccttc
gatggcaagccggctgcggacaacctcaagctcactgccaactga
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