Pseudomonas inefficax: RIN61_13540
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Entry
RIN61_13540 CDS
T09811
Name
(GenBank) glycosyltransferase family 4 protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
pix
Pseudomonas inefficax
Pathway
pix00540
Lipopolysaccharide biosynthesis
pix01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RIN61_13540
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pix01005
]
RIN61_13540
Lipopolysaccharide biosynthesis proteins [BR:
pix01005
]
Core region
RIN61_13540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
WNN37266
LinkDB
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Position
3036285..3037409
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AA seq
374 aa
AA seq
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MQLAFVLYKYFPFGGLQRDFMRIALECQKRGHQIRVYTLIWEGDIPPGFEVLVAPVKAIF
NHRRNEKLSAWMAADLAKRPVDRLIGFNKMPGLDVYYAADGCFEDKAQTLRGGLYRRWGR
YRHFAEYERAVFAKDAHTEVLMISEVQQPLFIKHYGTPVERFHLLPPGISQDRRAPANAS
EIRAEFRKEFNLGDDDLLLVQIGSGFKTKGVDRSLKALAALPSALRKRTRLMVIGQDDPK
VFQLQSATLGLGDQVQFLKGRSDIPRFLLGADLLIHPAYNENTGTVLLEALVAGLPVLVS
KVCGYAHYIAEADSGLVLDEPFEQEQLNGYLQRMLEDQQARASWSRNGLAFAETADLYSM
PQHAADVILGQESA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggctttcgtactttacaaatatttccccttcggcgggctgcagcgcgacttc
atgcgcattgccctggaatgccagaagcggggccatcagatccgtgtgtacacgctgatc
tgggagggtgacattccgccgggcttcgaagtgctggtggcgccggtgaaggcgattttc
aaccaccgccgcaacgagaagctcagcgcctggatggccgccgacctggccaagcgcccg
gtcgaccgcctgatcggcttcaacaagatgcctgggctggatgtgtactacgccgccgat
ggctgtttcgaggacaaggcgcagaccctgcgtggcggcctgtaccgccgctggggccgc
taccggcactttgccgagtacgaacgtgcggtgttcgccaaggatgcccataccgaagtg
ctgatgatttccgaagttcagcagccgctgttcatcaagcactacggcaccccggtggag
cgtttccacctgctgccgccgggcatttcccaggaccgccgcgcgccggccaatgccagc
gagatccgcgcggagttccgcaaggaattcaacctgggcgacgacgacctgctgctggtg
cagattggctcgggcttcaagaccaagggcgtcgaccgcagcctcaaggccctggccgca
ctgccttcggccctgcgcaagcgcaccaggctgatggtgatcggccaggatgaccccaag
gtgttccagctgcaaagcgctaccttgggcctgggcgatcaggtgcagttcctcaagggc
cgcagcgacatcccgcgcttcctgctgggcgccgacctgctgatccacccggcgtacaac
gagaacaccggcacggtgctgctcgaggcgctggtggccggcctgccggtgctggtctcc
aaagtgtgcggctacgcccactacattgccgaagccgacagcgggctggtgctggacgag
ccgttcgagcaggaacagctcaatggctacctgcagcgcatgctcgaggaccaacaggcc
cgcgccagctggtcgcgcaacggcctggcgtttgctgaaaccgccgacctgtacagcatg
ccgcagcatgccgctgatgtgatcctggggcaggagtccgcatga
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