Pseudomonas inefficax: RIN61_14505
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Entry
RIN61_14505 CDS
T09811
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00900
Terpenoid backbone biosynthesis
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RIN61_14505 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pix01006
]
RIN61_14505 (ispA)
Enzymes [BR:
pix01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RIN61_14505 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RIN61_14505 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
RIN61_14505 (ispA)
Prenyltransferases [BR:
pix01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RIN61_14505 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WNN37443
LinkDB
All DBs
Position
complement(3230585..3231472)
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AA seq
295 aa
AA seq
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MIGTYQASCQARVDAALEPLFVAPTKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGA
PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSPQADSIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHK
TGALIEASVRLGALASARAEQAQLAALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYAVELRDQALVALSGFGDKAEPLRALARYIVERRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcacctaccaggccagctgccaggcccgggtcgacgccgccctcgagccgttg
ttcgtcgccccgaccaaggaactcgaacgcctttacgccgccatgcgctacagcgtgatg
aacggtggcaaacgtgttcgtccgctgctggcctacgcggcctgcgaagccttgggcgcc
ccggccgaacaggccaacggcgcagcctgcgccgtggaactgatccacgcctactcgctg
gtgcatgacgacctgccggccatggatgacgacgacctgcgccgcggccagccgaccacc
cacaaagccttcgatgaggcctgcgcgatcctcgccggcgacggcttgcagagcctggcc
ttcagcgccctgctcgacccgcgcctgagcccgcaggctgacagcattcgcctggccatg
gtccaggctttggccaaggcggccggcccggcaggtatggttggtggccaggccatcgac
ctgggctcggttggcctgaagctggaccagcaggcgctggagttcatgcaccggcacaag
accggtgcgctgatcgaagccagcgtgcgcctcggcgccctggccagcgcccgcgccgaa
caggcgcaactggctgccctgcagacctatgcacaggccatcggcctggcattccaggtg
caggacgacatcctcgatgtggaaagcgacaccgcgaccctgggcaaacgccaaggggct
gatatcgcccgagacaaaccgacctacccggcgctgctgggcctggaagcggccaaggcc
tatgcggtcgaactgcgcgaccaggcgctggtcgcactgagtgggttcggcgacaaggcc
gagccgctgcgagcgctggcacgctacatcgtcgaacgccgcaactga
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