Pseudomonas inefficax: RIN61_15285
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Entry
RIN61_15285 CDS
T09811
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00260
Glycine, serine and threonine metabolism
pix00460
Cyanoamino acid metabolism
pix00630
Glyoxylate and dicarboxylate metabolism
pix00670
One carbon pool by folate
pix00680
Methane metabolism
pix01100
Metabolic pathways
pix01110
Biosynthesis of secondary metabolites
pix01120
Microbial metabolism in diverse environments
pix01200
Carbon metabolism
pix01230
Biosynthesis of amino acids
pix01240
Biosynthesis of cofactors
pix04981
Folate transport and metabolism
Module
pix_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RIN61_15285 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RIN61_15285 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RIN61_15285 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RIN61_15285 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RIN61_15285 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RIN61_15285 (glyA)
Enzymes [BR:
pix01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RIN61_15285 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WNN37584
LinkDB
All DBs
Position
complement(3396347..3397600)
Genome browser
AA seq
417 aa
AA seq
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MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagctctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaggcacagggctcggtcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggttgcgagtacgtcgacgtcgtcgagcagctggccatcgac
cgtgccaagcaactgttcggcgccgactacgccaacgtccagccgcacgccggctcccag
gccaacgctgccgtctacctggccttgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggtggccacctgacccacggtgcttcggtaagctcctcgggcaagctgtac
aacgccatccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggctgtcgagcacaagccgaagatgatcgttgccggcttctctgcctactcgcaggtt
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtgtacccgaaccctgttccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggtggcccgctggagcacgtcatcgctgccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcttaccagcagcaggtagtgaagaacgcccaggccatggccagcgtg
ttcatcgagcgtggtttcgacgtggtttccggtggtacccagaaccacctgttcctgctt
tcgctgatcaagcaggaaatctccggcaaggacgctgacgccgccctgggcaaagccttc
atcaccgtcaacaagaactcggtaccgaacgacccacgttccccgttcgtcacctcgggc
ctgcgtttcggcaccccagccgttaccacccgtggtttcaaggaagccgagtgccgcgag
ctggctggctggatctgcgacatcctggctgacctgaacaacgaagcggtgatcgacgcc
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtttacggcaactga
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