Pseudomonas inefficax: RIN61_15690
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Entry
RIN61_15690 CDS
T09811
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_15690 (phrB)
Enzymes [BR:
pix01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RIN61_15690 (phrB)
DNA repair and recombination proteins [BR:
pix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RIN61_15690 (phrB)
Prokaryotic type
RIN61_15690 (phrB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WNN37658
LinkDB
All DBs
Position
complement(3483859..3485301)
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AA seq
480 aa
AA seq
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MHLTWLRSDLRIDDNTALAAASERGPTLALWLVSPGQWLAHDDAACKVDFWLRNLRDLRQ
SLERLNIPLLIRRIDIWDQAPQAVLDVCRQHQVQSVHWNEEYGINEQRRDDATRALLEKS
SIQAHSHLDQLLFRPGTILTRSGDYFQVFSQFKKNCLEHLHRGLPALAHRVKRQAPLQIT
SDPIPEHVDGFEKPAQTLRDHWPAGEAEAQARLARFLDETIDDYHQLRDLPAKPGTSQLS
TYLAAGVISPRQCLHGALASNRGEFDSGSSGVQTWVNELLWREFYKHILAGYPQVSRHRA
FRAQTEALPWRDAPADLEAWEQGRTGFPIIDAAMRQLLDTGWMHNRLRMIVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVTQSQRFDPQGRFIR
HWLPELQRLDEKAIHLPLISADLFARQSYYRPIVDLDSSRQRALEAFKNLPRRQDQRAAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacttggctgcgcagcgacctgcgcatcgatgacaacaccgcgctcgccgcc
gccagcgagcgcgggccgacccttgccctgtggctggtcagccccgggcaatggctggcc
catgacgacgccgcgtgcaaagtggacttctggctgcgcaacctgcgcgacctgcgccag
tcgctggagcgcctgaacatacctctgctgatccgcaggatcgacatctgggaccaggcg
ccgcaggccgtgctagacgtctgccgccaacatcaggtgcaaagcgtgcactggaacgag
gagtacggcatcaacgagcaacgccgcgacgacgctacccgcgcgctgctggaaaagtcg
tccatccaggcccacagccatctcgaccagctgttgttccgcccgggcaccatccttacc
cgcagcggtgactacttccaggtgttcagccagttcaagaagaactgcctggagcacctg
caccgaggcctcccggccctggcccaccgggtaaaacgccaggcaccactgcagatcacc
agcgacccgatccctgagcacgtggacggtttcgaaaaacccgcgcaaacactgcgcgac
cactggccggccggcgaagccgaagcgcaggcgcggctggcccgctttctcgacgaaacc
atcgacgactaccaccagctgcgtgacttgcctgccaagcccggtaccagccagctctcc
acctacctggccgctggcgtgatctcgccgcgccagtgcctgcacggcgccctggccagc
aaccgcggtgagttcgacagcggcagcagtggcgtgcaaacctgggtcaacgagctgctc
tggcgcgaattctacaaacacatcctggccggttatccacaggtctcgcgtcaccgcgcc
ttccgcgcccagaccgaagccctgccctggcgcgacgcaccggccgacctcgaagcctgg
gaacagggccgaaccggcttccccatcatcgacgccgccatgcgccagctgctggatacc
gggtggatgcacaaccgcctgcgcatgatcgtggccatgttcctcagcaagaacctgctg
atcgactggcgcaagggcgagcgacatttcatgcgccacctgatagacggcgacctggcc
gccaacaacggcggctggcagtggagcgcgtccactggcaccgacgcggtgccctatttc
cgcatcttcaacccggttacgcagtcgcagcgtttcgacccgcaggggcgtttcattcgg
cactggctgccggaattgcaaaggctggatgaaaaagctattcatcttcccttaatatca
gccgatctttttgccagacaatcctactaccgtccaatcgtcgatctcgacagcagtcgc
cagcgcgcactggaggcattcaagaacctcccgcgccggcaggatcagagggcagcatct
tga
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