Pseudomonas inefficax: RIN61_16535
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Entry
RIN61_16535 CDS
T09811
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pix03019
]
RIN61_16535 (rapZ)
Messenger RNA biogenesis [BR:
pix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RIN61_16535 (rapZ)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
SKI
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WNN37819
LinkDB
All DBs
Position
complement(3669941..3670795)
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AA seq
284 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDNGFYCIDNLPAGLLPQLAENALINTELLQPKVAVSID
ARNLPSHLTRFPELLEEARARHIQCDVLYLDADEDVLLKRFSETRRRHPLTNADRSLAEA
IRVESELLGPIADLADLKIDTTSLNLYQLRDSIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREHSGLEQPVIDYLAAQADVEEMFNDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYITERLGQLLQQSLKNVQVRHRDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcatcgtcagcggccggtccggctccggcaagagcaccgccctcgatgtc
ctggaagacaacggtttctactgcattgacaacctgcccgccgggctgctgccgcagctg
gcggaaaatgcgctgatcaacaccgaattactgcaacccaaggttgccgtgtcgatcgac
gcacgcaacctgcccagccacctgacgcgtttccccgagttgctcgaagaagcccgcgcc
cggcatatccagtgcgacgtgctgtacctggatgccgacgaagacgtactgctcaagcgc
ttctcggaaacccgccgacgccacccgctgaccaacgccgaccgctcgctcgcggaagcg
attcgggtggaaagcgaattactggggccgattgcagacctggccgacctgaagatcgac
actaccagcctgaacctgtaccagctgcgtgattcgatcaagctgcgcctgctcaaccag
cccgaacctggaacggcgttcctggtcgagtcgttcggtttcaagcgcggaatgccggtc
gatgccgacctggtgttcgatgtgcgctgcctgcccaacccctactggaagcccgaactg
cgtgagcactccggccttgagcaaccggtgatcgactacctggccgcacaggcggatgtc
gaagagatgttcaacgacatttccagctacctgctcaagtggctgccccgcttcgccgcc
agcaaccgtgcctacgtcaccattgccattggctgcaccggcggccaccaccgctcggtg
tacatcaccgagcgccttggccagttgctgcagcaatccctgaaaaacgtccaggtccgc
caccgcgacctctag
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