Pseudomonas inefficax: RIN61_16655
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Entry
RIN61_16655 CDS
T09811
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pix03032
]
RIN61_16655
03036 Chromosome and associated proteins [BR:
pix03036
]
RIN61_16655
03400 DNA repair and recombination proteins [BR:
pix03400
]
RIN61_16655
DNA replication proteins [BR:
pix03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RIN61_16655
Chromosome and associated proteins [BR:
pix03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RIN61_16655
DNA repair and recombination proteins [BR:
pix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RIN61_16655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
NTS
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WNN37843
LinkDB
All DBs
Position
3689556..3689837
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAESIAAPKATAKNALEQLGQIVADQLENGAEITLPGIGKLKVTERPAR
TGRNPSTGAAIEIAAKKVVKFVPAKVLTDAINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaccaaagaccaactgattgccgacatcgccgaatcgatcgccgcgccaaaa
gccaccgccaagaacgctctggagcaactgggccagatcgttgccgatcagctggaaaac
ggcgctgaaatcactctgccaggcatcggcaagctgaaagtcaccgagcgtcctgcccgt
accggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtcgtcaag
ttcgttccagccaaagtgctgaccgacgccatcaacaagtaa
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integrated database retrieval system
