Pseudomonas inefficax: RIN61_17135
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Entry
RIN61_17135 CDS
T09811
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pix
Pseudomonas inefficax
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pix03036
]
RIN61_17135 (xerD)
Chromosome and associated proteins [BR:
pix03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RIN61_17135 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
RsbRD_N
Motif
Other DBs
NCBI-ProteinID:
WNN37934
LinkDB
All DBs
Position
3799043..3799939
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AA seq
298 aa
AA seq
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MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHGVSLPDAGRELILDHL
AWRLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVE
ALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLALDQVNLRQGVLRVMGKGSKERLV
PMGEEAVLWLQRYLRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKP
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctagaccaccccctgatcgaccagttcctcgacgccctgtggcttgaaaag
ggcctgtccgacaacacccgcgtgtcctaccgcagtgacctggccctgttcaacggctgg
ttgcaggaacatggcgtcagcttgcccgacgccggacgcgagctgattctcgaccacctg
gcctggcgcctcgaccagggctacaagccgcgctccacggcgcgcttcctgtccggcctg
cgcggcttcttccgctacctgttgcgggaaaaactggtggccatcgaccccaccctgcaa
gtggatatgccgcaactgggcaagccgctgcccaagtcgttgtccgaagcagacgtcgaa
gccttgctacaagctccggacctgggcgaagccatcggccagcgtgaccgcgccatgctc
gaagtgctctacgcctgcggcctgcgtgtcaccgagctggtcagcctggccctcgaccag
gtcaacctgcgccaaggcgtgctgcgggtgatgggcaagggcagcaaggagcgcctggtg
cccatgggcgaggaggcggtgctgtggttgcagcgctacctgcgcgatggccgcgccgaa
ctgctcaatggccgccccagcgacgtcttgttccccagccagcgtggcgagcagatgacc
cgtcagaccttctggcatcgtatcaagcaccatgcccgggtcgccggtatcgacaagccg
ctgtcaccgcacaccctgcgtcatgccttcgctactcacctgctcaaccatggcgccgac
ttgcgtgtggtgcagatgctgctgggccacagtgacctgtcgactacgcagatctacacc
catgtcgccaaggcccgcctgcagcaactgcatgcccagcaccacccgcgtggatga
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