Pseudomonas inefficax: RIN61_17265
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Entry
RIN61_17265 CDS
T09811
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pix
Pseudomonas inefficax
Pathway
pix00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RIN61_17265 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pix01007
]
RIN61_17265 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pix03016
]
RIN61_17265 (lysS)
Enzymes [BR:
pix01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RIN61_17265 (lysS)
Amino acid related enzymes [BR:
pix01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RIN61_17265 (lysS)
Transfer RNA biogenesis [BR:
pix03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RIN61_17265 (lysS)
Prokaryotic type
Other AARSs
RIN61_17265 (lysS)
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AsnA
Motif
Other DBs
NCBI-ProteinID:
WNN37960
LinkDB
All DBs
Position
3828904..3830406
Genome browser
AA seq
500 aa
AA seq
DB search
MSDLKTEAQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLV
LGTTDVPYGDKVFHFGEPFARLSVFDSILKYNPELTAADLQDVDRAREIAKKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagaccgaagcgcaagacctgcaacaggaagaaaacgccctgatcgcc
ctgcgcaaggaaaagcttgccgccgagcgcgccaagggcaatgccttccccaatgacttc
cgtcgcgacagctactgcaacgacctgcagaagcagtatgcggacaagaccaaggaagaa
ctggaagctgcagcgattccggtcaaggttgccggccgcatcatgctcaaccgcggctcg
ttcatggtcattcaggacatgaccggccgtattcaggtctacgtcaaccgcaagaccctg
cccgaagaaaccctggctgcggtcaagacctgggacctgggcgacatcatcagcgccgaa
ggtaccctggcccgttccggcaagggcgacctgtacgtcgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgcccgctacccgacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgttacgtcgacctgatggtcaatgaagaaacccgccacaccttccgt
gtgcgttcgcaggtgatttcgcacatccgcaagttcctcatcgagcgcgacttcctcgaa
gtcgagacgccgatgctgcaaaccatcccgggtggtgccgcggccaagccgttcgaaacc
caccacaacgccctggacatggccatgttcctgcgtattgcgccggagctgtacctcaag
cgcctggtggttggtggcttcgagaaggtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgctcgagttttaccaggcctacgct
gactaccgcgacaacatggacctcaccgaggaactgttccgcgagctggcgcagttggtg
ctgggcactaccgacgtgccgtacggcgacaaggtgttccactttggcgagccgttcgcc
cgcctgtcggtattcgactcgatcctcaagtacaaccccgagctgaccgccgccgacctg
caggacgtcgaccgcgcccgcgagatcgccaaaaaggccggcgccaaggtgctgggccac
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggag
cagccgcacttcatcaccgagtacccgttcgaagtgtcgccgctggcccgtcgcaacgac
gacaacccggctgttaccgaccgtttcgagctgttcatcggtggccgcgagattgccaac
gcctactccgagctcaacgatgccgaagaccaggccgagcgcttcctggcccaggtggcc
gagaaggacgccggtgacgacgaagccatgcattatgacgccgacttcgttcgcgccctg
gagtacggcatgccgccgactgctggtgaaggcatcggcatcgaccgcctggtgatgctg
ctgaccaactcgccgtcgatccgcgacgtgatcctgttcccgcacatgcgtccgcaggcc
tga
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