Pseudomonas inefficax: RIN61_17370
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Entry
RIN61_17370 CDS
T09811
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
pix
Pseudomonas inefficax
Module
pix_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pix00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pix02000
]
RIN61_17370
01504 Antimicrobial resistance genes [BR:
pix01504
]
RIN61_17370
Transporters [BR:
pix02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RIN61_17370
Antimicrobial resistance genes [BR:
pix01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RIN61_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
DUF3248
FliJ
Motif
Other DBs
NCBI-ProteinID:
WNN37978
LinkDB
All DBs
Position
3853223..3854323
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AA seq
366 aa
AA seq
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MLRHALSIALSAAAVLLLAACGQEAAPPAAPRPALVVQPQPAEAAADSYPGEVRARFEPE
LAFRIGGKVSKRLVEEGQRVKAEQPLAELDPQDVRLQLEANRAQLAAAEANLSLVRAERD
RYQKLLDRQMVSHSQFDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKR
QVEVGQVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQERFQGRIR
ELSPAADPRSRTFAARIAFTSAATPAELGQSARVFIAHEGLIPLAVPLSAVTAENGQAYV
WRVTKDSRLERAVVRLGAYGADSVPVLEGLAPGDWVVAAGGHVLREGQEIRPVDRTNRVV
NLTAKE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccatgccttgtccatcgctctgtccgccgctgccgtgctgttgctggcggcg
tgcggccaggaagccgccccacctgctgcgccgcgcccggcgctggtggtgcagccgcag
ccggccgaagccgctgccgacagttaccccggcgaagtgcgggcgcgcttcgagccggag
ctggctttccgcatcggcggcaaggtcagcaaacgcctggtcgaggaggggcagcgggtc
aaggccgagcagccgctggccgaacttgacccgcaggatgtgcgcctgcaactggaagcc
aaccgtgcccagttggcggccgccgaagccaacctgtcgctggtgcgcgccgagcgtgat
cgttaccagaagctgctggaccggcagatggtcagtcattcccagttcgataacgccgaa
aacctctatcgcgccggcctagcccggctgaaacaggccaaggccgagttcgacgtggcc
ggcaatcaggctgaatatgccgtgctgcgcgcaccccaggccggggtgatcgccaagcgc
caggtggaagtgggccaggtggtcgccgcagggcagaccgtgttcaccctggccgccgat
ggcgagcgggaagtggccatcggcctgccggagcagcagttcgcccgcttcgccgtgggc
cagccggtgagcgtggagctgtggtcgcacccgcaagagcgcttccaggggcgcatccgc
gagctgtcaccggccgccgacccgcgttcgcgcaccttcgctgcccgcatcgcctttacc
tcggccgccacaccggcggagctgggccagagcgcccgggtattcatcgcccacgaaggg
ctgatcccgctggcggtgcccctgtcggcagtcactgcggaaaacggccaggcctacgtc
tggcgggtcaccaaggacagccgcctggagcgggcagtggtacgcctgggggcttatggt
gccgacagcgtacccgtgctcgaaggcctcgcccccggcgactgggtagtcgccgcgggt
ggccatgtattgcgcgagggccaggagatacgccccgtggatcgtaccaatcgcgtagtg
aacctgacggccaaggagtaa
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